The advent of the “omics” era in biology research has brought new challenges and requires
the development of novel strategies to answer previously intractable questions. Molecular …

Highlights•We review PPI networks charted in recent years by high throughput studies and
stored in databases.•Likely reasons for the poor overlap between PPI detected by different …

Cytoscape is one of the most popular open‐source software tools for the visual exploration
of biomedical networks composed of protein, gene, and other types of interactions. It offers …

The CluePedia Cytoscape plugin is a search tool for new markers potentially associated to
pathways. CluePedia calculates linear and non-linear statistical dependencies from …

Cone-rod dystrophies (CORDs) are a heterogeneous group of inherited retinopathies (IRDs)
with more than 30 already known disease-causing genes. Uncertain phenotypes and …

GLay provides Cytoscape users an assorted collection of versatile community structure
algorithms and graph layout functions for network clustering and structured visualization …

Metscape is a plug-in for Cytoscape, used to visualize and interpret metabolomic data in the
context of human metabolic networks. We have developed a metabolite database by …

We present iRefWeb, a web interface to protein interaction data consolidated from 10 public
databases: BIND, BioGRID, CORUM, DIP, IntAct, HPRD, MINT, MPact, MPPI and OPHID …

A previous meta-analysis of genome-wide association data by the Cohorts for Heart and
Aging Research in Genomic Epidemiology and CKDGen consortia identified 16 loci …

Meat tenderness represents a complex assembly of different cellular pathways. As a
consequence, genomics studies have revealed many different proteins considered as …