The parallelism motifs of genomic data analysis

K Yelick, A Buluç, M Awan, A Azad… - … of the Royal …, 2020 - royalsocietypublishing.org
Genomic datasets are growing dramatically as the cost of sequencing continues to decline
and small sequencing devices become available. Enormous community databases store …

Managing Healthcare Infodemic by deep learning in providing healthcare services

F Ahmad, M Umer, S Sadiq, R Majeed… - ACM Transactions on …, 2023 - dl.acm.org
Digital Health care data acquisition and processing is performed by Artificial Intelligence and
Internet of Things technologies and digitization of data and information affects the patients' …

[PDF][PDF] Scalable Text Index Construction

T Bingmann, P Dinklage, J Fischer… - Algorithms for Big …, 2023 - library.oapen.org
Scalable Text Index Construction Page 263 Scalable Text Index Construction Timo Bingmann1,
Patrick Dinklage2, Johannes Fischer2, Florian Kurpicz2 (B), Enno Ohlebusch3, and Peter …

Full-text search engine with suffix index for massive heterogeneous data

W Xu, H Chen, Y Huan, X Hu, G Nong - Information Systems, 2022 - Elsevier
Existing popular search engines like Elasticsearch (ES) commonly use inverted indices to
quickly retrieve source data matching a given set of queries. However, an inverted index …

Teaching computational genomics and bioinformatics on a high performance computing cluster—a primer

A Sethuraman - Biology Methods and Protocols, 2022 - academic.oup.com
The burgeoning field of genomics as applied to personalized medicine, epidemiology,
conservation, agriculture, forensics, drug development, and other fields comes with large …

[PDF][PDF] Parallel text index construction

F Kurpicz - 2020 - d-nb.info
The focus of this dissertation is the parallel construction of text indices. Text indices provide
additional information about a text that allow to answer queries faster. Fulltext indices for …

Порівняльний аналіз розподілених суфіксних дерев і традиційних методів управління даними.

Y Sadovyi - COMPUTER-INTEGRATED TECHNOLOGIES …, 2024 - cit-journal.com.ua
This article provides a comprehensive review of various methods for implementing suffix
trees, comparing them with traditional data representation techniques such as prefix trees …

[PDF][PDF] PARALLEL AND SCALABLE COMBINATORIAL STRING ALGORITHMS ON DISTRIBUTED MEMORY SYSTEMS

P Flick - 2019 - core.ac.uk
The work on this project was initially motivated by a problem in Metagenomics assembly.
The grand challenge Iowa corn soil metagenomic data set sequenced at the Joint Genome …