[HTML][HTML] Can predicted protein 3D structures provide reliable insights into whether missense variants are disease associated?
Abstract Knowledge of protein structure can be used to predict the phenotypic consequence
of a missense variant. Since structural coverage of the human proteome can be roughly …
of a missense variant. Since structural coverage of the human proteome can be roughly …
Wide spectrum of NR5A1‐related phenotypes in 46, XY and 46, XX individuals
Steroidogenic factor 1 (NR5A1, SF‐1, Ad4BP) is a transcriptional regulator of genes
involved in adrenal and gonadal development and function. Mutations in NR5A1 have been …
involved in adrenal and gonadal development and function. Mutations in NR5A1 have been …
New binding sites, new opportunities for GPCR drug discovery
Many central biological events rely on protein–ligand interactions. The identification and
characterization of protein-binding sites for ligands are crucial for the understanding of …
characterization of protein-binding sites for ligands are crucial for the understanding of …
Caver Web 1.0: identification of tunnels and channels in proteins and analysis of ligand transport
Caver Web 1.0 is a web server for comprehensive analysis of protein tunnels and channels,
and study of the ligands' transport through these transport pathways. Caver Web is the first …
and study of the ligands' transport through these transport pathways. Caver Web is the first …
CageCavityCalc (C3): A Computational Tool for Calculating and Visualizing Cavities in Molecular Cages
Organic (porous) and metal–organic cages are promising biomimetic platforms with diverse
applications spanning recognition, sensing, and catalysis. The key to the emergence of …
applications spanning recognition, sensing, and catalysis. The key to the emergence of …
The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters
T Wagner, U Ermler, S Shima - Science, 2016 - science.org
Biological methane formation starts with a challenging adenosine triphosphate (ATP)–
independent carbon dioxide (CO2) fixation process. We explored this enzymatic process by …
independent carbon dioxide (CO2) fixation process. We explored this enzymatic process by …
Identifying a key spot for electron mediator-interaction to tailor CO dehydrogenase's affinity
Fe‒S cluster-harboring enzymes, such as carbon monoxide dehydrogenases (CODH),
employ sophisticated artificial electron mediators like viologens to serve as potent …
employ sophisticated artificial electron mediators like viologens to serve as potent …
D3Pockets: a method and web server for systematic analysis of protein pocket dynamics
The intrinsic dynamic properties of the ligand-binding pockets of proteins are important for
the protein function mechanism and thus are useful to drug discovery and development. Few …
the protein function mechanism and thus are useful to drug discovery and development. Few …
An atomic model for the human septin hexamer by cryo-EM
In order to form functional filaments, human septins must assemble into hetero-oligomeric
rod-like particles which polymerize end-to-end. The rules governing the assembly of these …
rod-like particles which polymerize end-to-end. The rules governing the assembly of these …
[HTML][HTML] Open source molecular modeling
The success of molecular modeling and computational chemistry efforts are, by definition,
dependent on quality software applications. Open source software development provides …
dependent on quality software applications. Open source software development provides …