Selfish genetic elements, genetic conflict, and evolutionary innovation

JH Werren - Proceedings of the National Academy of Sciences, 2011 - pnas.org
Genomes are vulnerable to selfish genetic elements (SGEs), which enhance their own
transmission relative to the rest of an individual's genome but are neutral or harmful to the …

The role of transposable elements in speciation

A Serrato-Capuchina, DR Matute - Genes, 2018 - mdpi.com
Understanding the phenotypic and molecular mechanisms that contribute to genetic
diversity between and within species is fundamental in studying the evolution of species. In …

Maize HapMap2 identifies extant variation from a genome in flux

JM Chia, C Song, PJ Bradbury, D Costich, N De Leon… - Nature …, 2012 - nature.com
Whereas breeders have exploited diversity in maize for yield improvements, there has been
limited progress in using beneficial alleles in undomesticated varieties. Characterizing …

Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution

S Schaack, C Gilbert, C Feschotte - Trends in ecology & evolution, 2010 - cell.com
Horizontal transfer is the passage of genetic material between genomes by means other
than parent-to-offspring inheritance. Although the transfer of genes is thought to be crucial in …

High-resolution genetic map** of maize pan-genome sequence anchors

F Lu, MC Romay, JC Glaubitz, PJ Bradbury… - Nature …, 2015 - nature.com
In addition to single-nucleotide polymorphisms, structural variation is abundant in many
plant genomes. The structural variation across a species can be represented by a 'pan …

Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata

JD Hollister, LM Smith, YL Guo, F Ott, D Weigel… - Proceedings of the …, 2011 - pnas.org
Transposable elements (TEs) are often the primary determinant of genome size differences
among eukaryotes. In plants, the proliferation of TEs is countered through epigenetic …

Bursts of transposable elements as an evolutionary driving force

A Belyayev - Journal of evolutionary biology, 2014 - academic.oup.com
A burst of transposable elements (TEs) is a massive outbreak that may cause radical
genomic rebuilding. This phenomenon has been reported in connection with the formation …

A triptych of the evolution of plant transposable elements

MI Tenaillon, JD Hollister, BS Gaut - Trends in plant science, 2010 - cell.com
Transposable elements (TEs) constitute the majority of angiosperm DNA, but the processes
that govern their accumulation remain mysterious. Here we discuss the three major forces …

[HTML][HTML] On the population dynamics of junk: a review on the population genomics of transposable elements

Y Bourgeois, S Boissinot - Genes, 2019 - mdpi.com
Transposable elements (TEs) play an important role in sha** genomic organization and
structure, and may cause dramatic changes in phenotypes. Despite the genetic load they …

Fine-Grained Analysis of Spontaneous Mutation Spectrum and Frequency in Arabidopsis thaliana

ML Weng, C Becker, J Hildebrandt, M Neumann… - Genetics, 2019 - academic.oup.com
Mutations are the ultimate source of all genetic variation. However, few direct estimates of
the contribution of mutation to molecular genetic variation are available. To address this …