[LIBRO][B] Algorithms and theory of computation handbook, volume 2: special topics and techniques

MJ Atallah, M Blanton - 2009 - books.google.com
This handbook provides an up-to-date compendium of fundamental computer science
topics, techniques, and applications. Along with updating and revising many of the existing …

[PDF][PDF] DNA Computing-Foundations and Implications.

L Kari, S Seki, P Sosík - Handbook of natural computing, 2012 - Citeseer
DNA computing is an area of natural computing based on the idea that molecular biology
processes can be used to perform arithmetic and logic operations on information encoded …

Palindromes in involutive Fibonacci arrays

H Blasiyus, DKS Christy - The Journal of Supercomputing, 2024 - Springer
The combinatorial properties of Fibonacci words and arrays are now a popularly studied
concept in formal language theory. One such property is the palindromic property of words …

Longest gapped repeats and palindromes

M Dumitran, P Gawrychowski… - Discrete Mathematics & …, 2017 - dmtcs.episciences.org
A gapped repeat (respectively, palindrome) occurring in a word w is a factor uvu
(respectively, u^Rvu) of w. In such a repeat (palindrome) u is called the arm of the repeat …

[PDF][PDF] Testing generalised freeness of words

P Gawrychowski, F Manea… - … Symposium on Theoretical …, 2014 - drops.dagstuhl.de
Pseudo-repetitions are a natural generalisation of the classical notion of repetitions in
sequences: they are the repeated concatenation of a word and its encoding under a certain …

[LIBRO][B] Context-free languages and primitive words

M Ito, P Domosi - 2014 - books.google.com
A word is said to be primitive if it cannot be represented as any power of another word. It is a
well-known conjecture that the set of all primitive words Q over a non-trivial alphabet is not …

Counting (Watson-Crick) palindromes in Watson-Crick conjugates

K Mahalingam, A Maity, P Pandoh - Information and Computation, 2022 - Elsevier
A DNA string is a Watson-Crick (WK-) palindrome when the complement of its reverse is
equal to itself. The Watson-Crick map** θ is an involution that is also an antimorphism. In …

An extension of the Lyndon–Schützenberger result to pseudoperiodic words

E Czeizler, E Czeizler, L Kari, S Seki - Information and Computation, 2011 - Elsevier
One of the particularities of information encoded as DNA strands is that a string u contains
basically the same information as its Watson–Crick complement, denoted here as θ (u) …

Fine and Wilf's theorem and pseudo-repetitions

F Manea, R Mercaş, D Nowotka - International Symposium on …, 2012 - Springer
The notion of repetition of factors in words is central to considerations on sequences. One of
the recent generalizations regarding this concept was introduced by Czeizler et al.(2010) …

[PDF][PDF] Finding pseudo-repetitions

P Gawrychowski, F Manea, R Mercaş, D Nowotka… - 2012 - macau.uni-kiel.de
Pseudo-repetitions are a generalization of the fundamental notion of repetitions in
sequences, considered initially in the framework of DNA computing and bioinformatics. We …