Molecular dynamics simulation for all
The impact of molecular dynamics (MD) simulations in molecular biology and drug discovery
has expanded dramatically in recent years. These simulations capture the behavior of …
has expanded dramatically in recent years. These simulations capture the behavior of …
CHARMM: the biomolecular simulation program
Abstract CHARMM (Chemistry at HARvard Molecular Mechanics) is a highly versatile and
widely used molecular simulation program. It has been developed over the last three …
widely used molecular simulation program. It has been developed over the last three …
Scalable molecular dynamics with NAMD
NAMD is a parallel molecular dynamics code designed for high‐performance simulation of
large biomolecular systems. NAMD scales to hundreds of processors on high‐end parallel …
large biomolecular systems. NAMD scales to hundreds of processors on high‐end parallel …
Water determines the structure and dynamics of proteins
Water is an essential participant in the stability, structure, dynamics, and function of proteins
and other biomolecules. Thermodynamically, changes in the aqueous environment affect …
and other biomolecules. Thermodynamically, changes in the aqueous environment affect …
Water as an active constituent in cell biology
P Ball - Chemical reviews, 2008 - ACS Publications
When Szent-Györgyi called water the “matrix of life”, 1 he was echoing an old sentiment.
Paracelsus in the 16th century said that “water was the matrix of the world and of all its …
Paracelsus in the 16th century said that “water was the matrix of the world and of all its …
Biomolecular simulation: a computational microscope for molecular biology
Molecular dynamics simulations capture the behavior of biological macromolecules in full
atomic detail, but their computational demands, combined with the challenge of …
atomic detail, but their computational demands, combined with the challenge of …
Bioinspired super‐wettability from fundamental research to practical applications
Engineered wettability is a traditional, yet key issue in surface science and attracts
tremendous interest in solving large‐scale practical problems. Recently, different super …
tremendous interest in solving large‐scale practical problems. Recently, different super …
Plant aquaporins: membrane channels with multiple integrated functions
Aquaporins are channel proteins present in the plasma and intracellular membranes of plant
cells, where they facilitate the transport of water and/or small neutral solutes (urea, boric …
cells, where they facilitate the transport of water and/or small neutral solutes (urea, boric …
Covalent organic frameworks: pore design and interface engineering
Conspectus Nature evolves fascinating molecular pores to achieve unique biological
functions based on a single pore or channel as observed for aquaporins and ion channels …
functions based on a single pore or channel as observed for aquaporins and ion channels …
Aquaporin water channels–from atomic structure to clinical medicine
The water permeability of biological membranes has been a longstanding problem in
physiology, but the proteins responsible for this remained unknown until discovery of the …
physiology, but the proteins responsible for this remained unknown until discovery of the …