The performance of coalescent-based species tree estimation methods under models of missing data

M Nute, J Chou, EK Molloy, T Warnow - BMC genomics, 2018 - Springer
Background Estimation of species trees from multiple genes is complicated by processes
such as incomplete lineage sorting, gene duplication and loss, and horizontal gene transfer …

A total-group phylogenetic metatree for Cetacea and the importance of fossil data in diversification analyses

GT Lloyd, GJ Slater - Systematic Biology, 2021 - academic.oup.com
Phylogenetic trees provide a powerful framework for testing macroevolutionary hypotheses,
but it is becoming increasingly apparent that inferences derived from extant species alone …