Machine learning for big data analytics in plants
Rapid advances in high-throughput genomic technology have enabled biology to enter the
era of 'Big Data'(large datasets). The plant science community not only needs to build its …
era of 'Big Data'(large datasets). The plant science community not only needs to build its …
Whole genome analysis of a schistosomiasis-transmitting freshwater snail
Biomphalaria snails are instrumental in transmission of the human blood fluke Schistosoma
mansoni. With the World Health Organization's goal to eliminate schistosomiasis as a global …
mansoni. With the World Health Organization's goal to eliminate schistosomiasis as a global …
Emerging techniques to decipher microRNAs (miRNAs) and their regulatory role in conferring abiotic stress tolerance of plants
MicroRNAs (miRNAs) are a distinct class of non-coding, small regulatory RNAs which have
evolved significantly in generating abiotic stress tolerance across a variety of model plants …
evolved significantly in generating abiotic stress tolerance across a variety of model plants …
The Physarum polycephalum Genome Reveals Extensive Use of Prokaryotic Two-Component and Metazoan-Type Tyrosine Kinase Signaling
P Schaap, I Barrantes, P Minx, N Sasaki… - Genome Biology and …, 2016 - academic.oup.com
Physarum polycephalum is a well-studied microbial eukaryote with unique experimental
attributes relative to other experimental model organisms. It has a sophisticated life cycle …
attributes relative to other experimental model organisms. It has a sophisticated life cycle …
GeneAI 3.0: powerful, novel, generalized hybrid and ensemble deep learning frameworks for miRNA species classification of stationary patterns from nucleotides
Due to the intricate relationship between the small non-coding ribonucleic acid (miRNA)
sequences, the classification of miRNA species, namely Human, Gorilla, Rat, and Mouse is …
sequences, the classification of miRNA species, namely Human, Gorilla, Rat, and Mouse is …
Identification of differentially expressed microRNAs in Culex pipiens and their potential roles in pyrethroid resistance
S Hong, Q Guo, W Wang, S Hu, F Fang, Y Lv… - Insect biochemistry and …, 2014 - Elsevier
Pyrethroids are the major class of insecticides used for mosquito control. Excessive and
improper use of insecticides, however, has resulted in pyrethroid resistance, which has …
improper use of insecticides, however, has resulted in pyrethroid resistance, which has …
MiR-125b regulates the proliferation and metastasis of triple negative breast cancer cells via the Wnt/β-catenin pathway and EMT
J Nie, HC Jiang, YC Zhou, B Jiang… - Bioscience …, 2019 - academic.oup.com
ABSTRACT Background/aim: MiR-125b plays an important role in breast cancer. The
current study was to explore the expression and function of miR-125b in triple negative …
current study was to explore the expression and function of miR-125b in triple negative …
Transcriptome-Wide Annotation of m5C RNA Modifications Using Machine Learning
The emergence of epitranscriptome opened a new chapter in gene regulation. 5-
methylcytosine (m5C), as an important post-transcriptional modification, has been identified …
methylcytosine (m5C), as an important post-transcriptional modification, has been identified …
Species-specific microRNA discovery and target prediction in the soybean cyst nematode
The soybean cyst nematode (SCN) is a devastating pathogen for economic and food
security considerations. Although the SCN genome has recently been sequenced, the …
security considerations. Although the SCN genome has recently been sequenced, the …
[HTML][HTML] Machine learning approaches for plant miRNA prediction: challenges, advancements, and future directions
Z Kuang, Y Zhao, X Yang - Agriculture Communications, 2023 - Elsevier
MicroRNA (miRNA) is an important regulator of gene expression in plants that functions to
regulate plant development and growth. Signature sequences and secondary structures that …
regulate plant development and growth. Signature sequences and secondary structures that …