Whole-genome duplication in teleost fishes and its evolutionary consequences

SMK Glasauer, SCF Neuhauss - Molecular genetics and genomics, 2014 - Springer
Whole-genome duplication (WGD) events have shaped the history of many evolutionary
lineages. One such duplication has been implicated in the evolution of teleost fishes, by far …

Turning a hobby into a job: how duplicated genes find new functions

GC Conant, KH Wolfe - Nature Reviews Genetics, 2008 - nature.com
Gene duplication provides raw material for functional innovation. Recent advances have
shed light on two fundamental questions regarding gene duplication: which genes tend to …

The multiple fates of gene duplications: deletion, hypofunctionalization, subfunctionalization, neofunctionalization, dosage balance constraints, and neutral variation

JA Birchler, H Yang - The Plant Cell, 2022 - academic.oup.com
Gene duplications have long been recognized as a contributor to the evolution of genes with
new functions. Multiple copies of genes can result from tandem duplication, from …

Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines

JA Birchler, RA Veitia - … of the National Academy of Sciences, 2012 - National Acad Sciences
We summarize, in this review, the evidence that genomic balance influences gene
expression, quantitative traits, dosage compensation, aneuploid syndromes, population …

The house spider genome reveals an ancient whole-genome duplication during arachnid evolution

EE Schwager, PP Sharma, T Clarke, DJ Leite… - BMC biology, 2017 - Springer
Background The duplication of genes can occur through various mechanisms and is thought
to make a major contribution to the evolutionary diversification of organisms. There is …

Retention of duplicated genes in evolution

E Kuzmin, JS Taylor, C Boone - Trends in Genetics, 2022 - cell.com
Gene duplication is a prevalent phenomenon across the tree of life. The processes that lead
to the retention of duplicated genes are not well understood. Functional genomics …

Dosage, duplication, and diploidization: clarifying the interplay of multiple models for duplicate gene evolution over time

GC Conant, JA Birchler, JC Pires - Current opinion in plant biology, 2014 - Elsevier
Highlights•Dosage balance is fluid and will change over time.•Duplicate genes are
preserved by interplay of multiple overlap** mechanisms.•Distinguishing duplicate gene …

Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification

FM Robertson, MK Gundappa, F Grammes… - Genome biology, 2017 - Springer
Background The functional divergence of duplicate genes (ohnologues) retained from whole
genome duplication (WGD) is thought to promote evolutionary diversification. However …

Exploring whole-genome duplicate gene retention with complex genetic interaction analysis

E Kuzmin, B VanderSluis, AN Nguyen Ba, W Wang… - Science, 2020 - science.org
INTRODUCTION Whole-genome duplication (WGD) events are pervasive in eukaryotes,
sha** the genomes of simple single-celled organisms, such as yeast, as well as those of …

The gene balance hypothesis: implications for gene regulation, quantitative traits and evolution

JA Birchler, RA Veitia - New Phytologist, 2010 - Wiley Online Library
The gene balance hypothesis states that the stoichiometry of members of multisubunit
complexes affects the function of the whole because of the kinetics and mode of assembly …