Computing environments for reproducibility: Capturing the “Whole Tale”
The act of sharing scientific knowledge is rapidly evolving away from traditional articles and
presentations to the delivery of executable objects that integrate the data and computational …
presentations to the delivery of executable objects that integrate the data and computational …
Revisiting the data lifecycle with big data curation
L Pouchard - International Journal of Digital Curation, 2015 - ijdc.net
As science becomes more data-intensive and collaborative, researchers increasingly use
larger and more complex data to answer research questions. The capacity of storage …
larger and more complex data to answer research questions. The capacity of storage …
Computational reproducibility of scientific workflows at extreme scales
We propose an approach for improved reproducibility that includes capturing and relating
provenance characteristics and performance metrics. We discuss two use cases: scientific …
provenance characteristics and performance metrics. We discuss two use cases: scientific …
Reproducibility in research: systems, infrastructure, culture
The reproduction and replication of research results has become a major issue for a number
of scientific disciplines. In computer science and related computational disciplines such as …
of scientific disciplines. In computer science and related computational disciplines such as …
Quantifying differences in cell line population dynamics using CellPD
EF Juarez, R Lau, SH Friedman, A Ghaffarizadeh… - BMC systems …, 2016 - Springer
Background The increased availability of high-throughput datasets has revealed a need for
reproducible and accessible analyses which can quantitatively relate molecular changes to …
reproducible and accessible analyses which can quantitatively relate molecular changes to …
Big provenance stream processing for data intensive computations
In the business and research landscape of today, data analysis consumes public and
proprietary data from numerous sources, and utilizes any one or more of popular data …
proprietary data from numerous sources, and utilizes any one or more of popular data …
A survey on reproducibility in parallel computing
S Hunold - arxiv preprint arxiv:1511.04217, 2015 - arxiv.org
We summarize the results of a survey on reproducibility in parallel computing, which was
conducted during the Euro-Par conference in August 2015. The survey form was handed out …
conducted during the Euro-Par conference in August 2015. The survey form was handed out …
Trust, but verify: An investigation of methods of verification and dissemination of computational research artifacts for transparency and reproducibility
CA Willis - 2020 - ideals.illinois.edu
In this study, I investigate how research communities are addressing concerns about the
quality and rigor of computational research. I focus specifically on initiatives to expand the …
quality and rigor of computational research. I focus specifically on initiatives to expand the …
Building a vision for reproducibility in the cyberinfrastructure ecosystem: Leveraging community efforts
The scientific computing community has long taken a leadership role in understanding and
assessing the relationship of reproducibility to cyberinfrastructure, ensuring that …
assessing the relationship of reproducibility to cyberinfrastructure, ensuring that …
Tales from the trenches: Can user support tools make a difference?
Those participating in HUST'15 appreciate the potential value of high quality tools and
technologies intended to enhance the user experience on large-scale computers. Given the …
technologies intended to enhance the user experience on large-scale computers. Given the …