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The SMC5/6 complex: folding chromosomes back into shape when genomes take a break
S Roy, H Adhikary, D D'Amours - Nucleic acids research, 2024 - academic.oup.com
High-level folding of chromatin is a key determinant of the shape and functional state of
chromosomes. During cell division, structural maintenance of chromosome (SMC) …
chromosomes. During cell division, structural maintenance of chromosome (SMC) …
Super-enhancers and their parts: from prediction efforts to pathognomonic status
IJMS | Free Full-Text | Super-Enhancers and Their Parts: From Prediction Efforts to
Pathognomonic Status Next Article in Journal Constitutional BRCA1 and MGMT Methylation Are …
Pathognomonic Status Next Article in Journal Constitutional BRCA1 and MGMT Methylation Are …
[PDF][PDF] Large-scale phenogenomic analysis of human cancers uncovers frequent alterations affecting SMC5/6 complex components in breast cancer
Cancer cells often experience large-scale alterations in genome architecture because of
DNA damage and replication stress. Whether mutations in core regulators of chromosome …
DNA damage and replication stress. Whether mutations in core regulators of chromosome …
Cancer fusion transcripts with human non-coding RNAs
T Mohammad, MA Zolotovskaia… - Frontiers in …, 2024 - pmc.ncbi.nlm.nih.gov
Cancer chimeric, or fusion, transcripts are thought to most frequently appear due to
chromosomal aberrations that combine moieties of unrelated normal genes. When being …
chromosomal aberrations that combine moieties of unrelated normal genes. When being …
The Smc5/6 complex counteracts R-loop formation at highly transcribed genes in cooperation with RNase H2
S Roy, H Adhikary, S Isler, D D'Amours - eLife, 2024 - elifesciences.org
The R-loop is a common transcriptional by-product that consists of an RNA-DNA duplex
joined to a displaced strand of genomic DNA. While the effects of R-loops on health and …
joined to a displaced strand of genomic DNA. While the effects of R-loops on health and …
[HTML][HTML] Loop Extrusion Machinery Impairments in Models and Disease
Structural maintenance of chromosomes (SMC) complexes play a crucial role in organizing
the three-dimensional structure of chromatin, facilitating key processes such as gene …
the three-dimensional structure of chromatin, facilitating key processes such as gene …
Enhancer clusters drive type I interferon-induced TRAIL overexpression in cancer, and its intracellular protein accumulation fails to induce apoptosis
Simple Summary Upon interferon stimulation, cancer cells upregulate the pro-apoptotic
cytokine TRAIL, but the mechanism of this upregulation remains unresolved. By examining …
cytokine TRAIL, but the mechanism of this upregulation remains unresolved. By examining …
Super-Enhancers: Gatekeepers of Breast Cancer Growth and Resistance
J Du, Z Zhang, W Tao - Available at SSRN 5150923, 2024 - papers.ssrn.com
The mechanisms underlying breast cancer development are diverse and complex. While the
roles of conventional oncogenes and signaling pathways have been increasingly …
roles of conventional oncogenes and signaling pathways have been increasingly …
InGene: Finding influential genes from embeddings of nonlinear dimension reduction techniques
We introduce InGene, the first of its kind, fast and scalable non-linear, unsupervised method
for analyzing single-cell RNA sequencing data (scRNA-seq). While non-linear …
for analyzing single-cell RNA sequencing data (scRNA-seq). While non-linear …