Virus strain from a mild COVID-19 patient in Hangzhou represents a new trend in SARS-CoV-2 evolution potentially related to Furin cleavage site

X **, K Xu, P Jiang, J Lian, S Hao, H Yao… - Emerging microbes & …, 2020 - Taylor & Francis
The mutations in the SARS-CoV-2 virus genome during COVID-19 dissemination are
unclear. In 788 COVID-19 patients from Zhejiang province, we observed decreased rate of …

[HTML][HTML] Codon usage bias of Venezuelan equine encephalitis virus and its host adaption

H Wang, S Liu, Y Lv, W Wei - Virus research, 2023 - Elsevier
Venezuelan equine encephalitis virus (VEEV) is an emerging zoonotic virus in the
alphavirus genus. It can be transmitted to humans due to spillover from equid-mosquito …

[HTML][HTML] A Review on Pathological and Diagnostic Aspects of Emerging Viruses—Senecavirus A, Torque teno sus virus and Linda Virus—In Swine

S Hawko, GP Burrai, M Polinas, PP Angioi… - Veterinary …, 2022 - mdpi.com
Simple Summary Worldwide demand for food is expected to increase due to population
growth and swine accounts for more than one-third of meat produced worldwide. Several …

Deep decoding of codon usage strategies and host adaption preferences of soybean mosaic virus

L Jiang, Q Zhang, S **ao, F Si - International Journal of Biological …, 2022 - Elsevier
Soybean mosaic virus (SMV) has threatened the global yield of Leguminosae crops, but the
mechanism of its infection, spread, and evolution remains unknown. A systemic analysis of …

[HTML][HTML] The synergic role of emerging and endemic swine virus in the porcine respiratory disease complex: Pathological and biomolecular analysis

GP Burrai, S Hawko, S Dei Giudici, M Polinas… - Veterinary …, 2023 - mdpi.com
Simple Summary Porcine respiratory disease complex (PRDC) represents a significant
source of economic losses to pig farmers and swine industry worldwide, due to reduced …

Genetic adaptations, biases, and evolutionary analysis of canine distemper virus Asia-4 lineage in a fatal outbreak of wild-caught civets in Thailand

C Piewbang, J Chansaenroj, P Kongmakee… - Viruses, 2020 - mdpi.com
Canine morbillivirus (CDV) is a serious pathogen that can cause fatal systemic disease in a
wide range of domestic and wildlife carnivores. Outbreaks of CDV in wildlife species lead to …

Comprehensive codon usage analysis of porcine deltacoronavirus

W He, N Wang, J Tan, R Wang, Y Yang, G Li… - Molecular phylogenetics …, 2019 - Elsevier
Porcine deltacoronavirus (PDCoV) is a newly identified coronavirus of pigs that was first
reported in Hong Kong in 2012. Since then, many PDCoV isolates have been identified …

Discovery of two novel Torque Teno viruses in Callithrix penicillata provides insights on Anelloviridae diversification dynamics

MAC Cosentino, M D'arc, FRR Moreira… - Frontiers in …, 2022 - frontiersin.org
The development of high-throughput sequencing (HTS) technologies and metagenomics
protocols deeply impacted the discovery of viral diversity. Moreover, the characterization of …

Discovery and comparative genomic analysis of a novel equine anellovirus, representing the first complete Mutorquevirus genome

M Fisher, M Nebroski, J Davies, E Janzen… - Scientific Reports, 2023 - nature.com
The complete genome of a novel torque teno virus species (Torque teno equus virus 2
(TTEqV2) isolate Alberta/2018) was obtained by high-throughput sequencing (HTS) of …

Codon usage bias in the H gene of canine distemper virus

X Wang, W Xu, K Fan, H Chiu, C Huang - Microbial Pathogenesis, 2020 - Elsevier
Canine distemper virus (CDV), a non-segmented single negative-stranded RNA (ssRNA), is
the etiological agent of canine distemper. Canine distemper is a highly contagious and …