Structure of linkage disequilibrium in plants

SA Flint-Garcia, JM Thornsberry… - Annual review of plant …, 2003 - annualreviews.org
Future advances in plant genomics will make it possible to scan a genome for
polymorphisms associated with qualitative and quantitative traits. Before this potential can …

Applications of single nucleotide polymorphisms in crop genetics

A Rafalski - Current opinion in plant biology, 2002 - Elsevier
The discovery of single nucleotide polymorphisms (SNPs) and insertions/deletions, which
are the basis of most differences between alleles, has been simplified by recent …

Prediction of total genetic value using genome-wide dense marker maps

THE Meuwissen, BJ Hayes, ME Goddard - genetics, 2001 - academic.oup.com
Recent advances in molecular genetic techniques will make dense marker maps available
and genoty** many individuals for these markers feasible. Here we attempted to estimate …

Structure of linkage disequilibrium and phenotypic associations in the maize genome

DL Remington, JM Thornsberry… - Proceedings of the …, 2001 - National Acad Sciences
Association studies based on linkage disequilibrium (LD) can provide high resolution for
identifying genes that may contribute to phenotypic variation. We report patterns of local and …

Association Map** of Kernel Size and Milling Quality in Wheat (Triticum aestivum L.) Cultivars

F Breseghello, ME Sorrells - Genetics, 2006 - academic.oup.com
Association map** is a method for detection of gene effects based on linkage
disequilibrium (LD) that complements QTL analysis in the development of tools for molecular …

Positional candidate cloning of a QTL in dairy cattle: identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition

B Grisart, W Coppieters, F Farnir, L Karim… - Genome …, 2002 - genome.cshlp.org
We recently mapped a quantitative trait locus (QTL) with a major effect on milk composition—
particularly fat content—to the centromeric end of bovine chromosome 14. We subsequently …

Commercial application of marker- and gene-assisted selection in livestock: Strategies and lessons,

JCM Dekkers - Journal of animal science, 2004 - academic.oup.com
During the past few decades, advances in molecular genetics have led to the identification
of multiple genes or genetic markers associated with genes that affect traits of interest in …

The use of molecular genetics in the improvement of agricultural populations

JCM Dekkers, F Hospital - Nature Reviews Genetics, 2002 - nature.com
Substantial advances have been made in the genetic improvement of agriculturally
important animal and plant populations through artificial selection on quantitative traits. Most …

An Arabidopsis Example of Association Map** in Structured Samples

K Zhao, MJ Aranzana, S Kim, C Lister, C Shindo… - PLoS …, 2007 - journals.plos.org
A potentially serious disadvantage of association map** is the fact that marker-trait
associations may arise from confounding population structure as well as from linkage to …

The impact of genetic relationship information on genomic breeding values in German Holstein cattle

D Habier, J Tetens, FR Seefried, P Lichtner… - Genetics Selection …, 2010 - Springer
Background The impact of additive-genetic relationships captured by single nucleotide
polymorphisms (SNPs) on the accuracy of genomic breeding values (GEBVs) has been …