New strategies and tools in quantitative genetics: how to go from the phenotype to the genotype
Quantitative genetics has a long history in plants: It has been used to study specific
biological processes, identify the factors important for trait evolution, and breed new crop …
biological processes, identify the factors important for trait evolution, and breed new crop …
Microfluidic platforms for plant cells studies
AS Nezhad - Lab on a Chip, 2014 - pubs.rsc.org
Conventional methods of plant cell analysis rely on growing plant cells in soil pots or
agarose plates, followed by screening the plant phenotypes in traditional greenhouses and …
agarose plates, followed by screening the plant phenotypes in traditional greenhouses and …
A microfluidic device and computational platform for high-throughput live imaging of gene expression
To fully describe gene expression dynamics requires the ability to quantitatively capture
expression in individual cells over time. Automated systems for acquiring and analyzing real …
expression in individual cells over time. Automated systems for acquiring and analyzing real …
New technologies for 21st century plant science
DW Ehrhardt, WB Frommer - The Plant Cell, 2012 - academic.oup.com
Plants are one of the most fascinating and important groups of organisms living on Earth.
They serve as the conduit of energy into the biosphere, provide food, and shape our …
They serve as the conduit of energy into the biosphere, provide food, and shape our …
3DCellAtlas Meristem: a tool for the global cellular annotation of shoot apical meristems
Modern imaging approaches enable the acquisition of 3D and 4D datasets capturing plant
organ development at cellular resolution. Computational analyses of these data enable the …
organ development at cellular resolution. Computational analyses of these data enable the …
DeepSeed local graph matching for densely packed cells tracking
M Liu, Y Liu, W Qian, Y Wang - IEEE/ACM transactions on …, 2019 - ieeexplore.ieee.org
The tracking of densely packed plant cells across microscopy image sequences is very
challenging, because their appearance change greatly over time. A local graph matching …
challenging, because their appearance change greatly over time. A local graph matching …
Network consistent data association
Existing data association techniques mostly focus on matching pairs of data-point sets and
then repeating this process along space-time to achieve long term correspondences …
then repeating this process along space-time to achieve long term correspondences …
Plant cell tracking using Kalman filter based local graph matching
M Liu, Y He, Y Wei, P ** multicellular
tissues is required for high throughput spatio-temporal quantitative measurements of a …
tissues is required for high throughput spatio-temporal quantitative measurements of a …
Context aware spatio-temporal cell tracking in densely packed multilayer tissues
Modern live imaging technique enables us to observe the internal part of a tissue over time
by generating serial optical images containing spatio-temporal slices of hundreds of tightly …
by generating serial optical images containing spatio-temporal slices of hundreds of tightly …
CNN-based two-stage cell segmentation improves plant cell tracking
W Jiang, L Wu, S Liu, M Liu - Pattern Recognition Letters, 2019 - Elsevier
Automated tracking of densely packed plant cells in time-lapse live imaging datasets is a
challenging task. A local graph matching algorithm was proposed to track such cells by …
challenging task. A local graph matching algorithm was proposed to track such cells by …