Deep reticulation: the long legacy of hybridization in vascular plant evolution

GW Stull, KK Pham, PS Soltis, DE Soltis - The Plant Journal, 2023 - Wiley Online Library
Hybridization has long been recognized as a fundamental evolutionary process in plants
but, until recently, our understanding of its phylogenetic distribution and biological …

Whole-genome duplication and plant macroevolution

JW Clark, PCJ Donoghue - Trends in plant science, 2018 - cell.com
Whole-genome duplication (WGD) is characteristic of almost all fundamental lineages of
land plants. Unfortunately, the timings of WGD events are loosely constrained and …

Constructing a broadly inclusive seed plant phylogeny

SA Smith, JW Brown - American journal of botany, 2018 - Wiley Online Library
Premise of the Study Large phylogenies can help shed light on macroevolutionary patterns
that inform our understanding of fundamental processes that shape the tree of life. These …

Impact of whole‐genome duplication events on diversification rates in angiosperms

JB Landis, DE Soltis, Z Li, HE Marx… - American journal of …, 2018 - Wiley Online Library
Premise of the Study Polyploidy or whole‐genome duplication (WGD) pervades the
evolutionary history of angiosperms. Despite extensive progress in our understanding of …

Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms

GW Stull, XJ Qu, C Parins-Fukuchi, YY Yang, JB Yang… - Nature Plants, 2021 - nature.com
Inferring the intrinsic and extrinsic drivers of species diversification and phenotypic disparity
across the tree of life is a major challenge in evolutionary biology. In green plants, polyploidy …

Interrogating genomic-scale data for Squamata (lizards, snakes, and amphisbaenians) shows no support for key traditional morphological relationships

FT Burbrink, FG Grazziotin, RA Pyron… - Systematic …, 2020 - academic.oup.com
Genomics is narrowing uncertainty in the phylogenetic structure for many amniote groups.
For one of the most diverse and species-rich groups, the squamate reptiles (lizards, snakes …

Plastid phylogenomic analysis of green plants: a billion years of evolutionary history

MA Gitzendanner, PS Soltis, GKS Wong… - American Journal of …, 2018 - Wiley Online Library
Premise of the Study For the past one billion years, green plants (Viridiplantae) have
dominated global ecosystems, yet many key branches in their evolutionary history remain …

Phylotranscriptomics resolves the phylogeny of Pooideae and uncovers factors for their adaptive evolution

L Zhang, X Zhu, Y Zhao, J Guo, T Zhang… - Molecular Biology …, 2022 - academic.oup.com
Adaptation to cool climates has occurred several times in different angiosperm groups.
Among them, Pooideae, the largest grass subfamily with∼ 3,900 species including wheat …

Plastid phylogenomic insights into the evolution of Caryophyllales

G Yao, JJ **, HT Li, JB Yang, VS Mandala… - Molecular Phylogenetics …, 2019 - Elsevier
The Caryophyllales includes 40 families and 12,500 species, representing a large and
diverse clade of angiosperms. Collectively, members of the clade grow on all continents and …

The origin of the legumes is a complex paleopolyploid phylogenomic tangle closely associated with the Cretaceous–Paleogene (K–Pg) mass extinction event

EJM Koenen, DI Ojeda, FT Bakker… - Systematic …, 2021 - academic.oup.com
The consequences of the Cretaceous–Paleogene (K–Pg) boundary (KPB) mass extinction
for the evolution of plant diversity remain poorly understood, even though evolutionary …