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Twenty years of plant genome sequencing: achievements and challenges
Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …
reference genome, in December 2000 heralded the beginning of the plant genome era …
Oleoresin defenses in conifers: chemical diversity, terpene synthases and limitations of oleoresin defense under climate change
Conifers have evolved complex oleoresin terpene defenses against herbivores and
pathogens. In co‐evolved bark beetles, conifer terpenes also serve chemo‐ecological …
pathogens. In co‐evolved bark beetles, conifer terpenes also serve chemo‐ecological …
MUMmer4: A fast and versatile genome alignment system
The MUMmer system and the genome sequence aligner nucmer included within it are
among the most widely used alignment packages in genomics. Since the last major release …
among the most widely used alignment packages in genomics. Since the last major release …
Genomic architectural variation of plant mitochondria—A review of multichromosomal structuring
ZQ Wu, XZ Liao, XN Zhang… - … of Systematics and …, 2022 - Wiley Online Library
Since the endosymbiont origin from α‐Proteobacteria, mitochondrial genomes have
undergone extremely divergent evolutionary trajectories among eukaryotic lineages …
undergone extremely divergent evolutionary trajectories among eukaryotic lineages …
Plant genome sequences: past, present, future
PJ Kersey - Current opinion in plant biology, 2019 - Elsevier
Highlights•Almost 600 complete plant genome assemblies are now available in public
repositories.•New sequencing technologies are producing genome assemblies of …
repositories.•New sequencing technologies are producing genome assemblies of …
The Cycas genome and the early evolution of seed plants
Cycads represent one of the most ancient lineages of living seed plants. Identifying genomic
features uniquely shared by cycads and other extant seed plants, but not non-seed …
features uniquely shared by cycads and other extant seed plants, but not non-seed …
A genome for gnetophytes and early evolution of seed plants
Gnetophytes are an enigmatic gymnosperm lineage comprising three genera, Gnetum,
Welwitschia and Ephedra, which are morphologically distinct from all other seed plants …
Welwitschia and Ephedra, which are morphologically distinct from all other seed plants …
Siberian larch (Larix sibirica Ledeb.) mitochondrial genome assembled using both short and long nucleotide sequence reads is currently the largest known …
Background Plant mitochondrial genomes (mitogenomes) can be structurally complex while
their size can vary from~ 222 Kbp in Brassica napus to 11.3 Mbp in Silene conica. To date …
their size can vary from~ 222 Kbp in Brassica napus to 11.3 Mbp in Silene conica. To date …
A reference genome sequence for giant sequoia
The giant sequoia (Sequoiadendron giganteum) of California are massive, long-lived trees
that grow along the US Sierra Nevada mountains. Genomic data are limited in giant sequoia …
that grow along the US Sierra Nevada mountains. Genomic data are limited in giant sequoia …
The Larix kaempferi genome reveals new insights into wood properties
C Sun, YH **e, Z Li, YJ Liu, XM Sun… - Journal of Integrative …, 2022 - Wiley Online Library
Here, through single‐molecule real‐time sequencing, we present a high‐quality genome
sequence of the Japanese larch (Larix kaempferi), a conifer species with great value for …
sequence of the Japanese larch (Larix kaempferi), a conifer species with great value for …