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Structural features of the protein kinase domain and targeted binding by small-molecule inhibitors
C Arter, L Trask, S Ward, S Yeoh, R Bayliss - Journal of Biological Chemistry, 2022 - jbc.org
Protein kinases are key components in cellular signaling pathways as they carry out the
phosphorylation of proteins, primarily on Ser, Thr, and Tyr residues. The catalytic activity of …
phosphorylation of proteins, primarily on Ser, Thr, and Tyr residues. The catalytic activity of …
Paul Ehrlich's magic bullet concept: 100 years of progress
K Strebhardt, A Ullrich - Nature Reviews Cancer, 2008 - nature.com
Exceptional advances in molecular biology and genetic research have expedited cancer
drug development tremendously. The declared paradigm is the development …
drug development tremendously. The declared paradigm is the development …
AlphaFill: enriching AlphaFold models with ligands and cofactors
Artificial intelligence-based protein structure prediction approaches have had a
transformative effect on biomolecular sciences. The predicted protein models in the …
transformative effect on biomolecular sciences. The predicted protein models in the …
Conformational states dynamically populated by a kinase determine its function
INTRODUCTION Protein kinases mediate many cell signaling processes. Central to their
physiological function is the regulation of their binding and enzymatic activities, which is …
physiological function is the regulation of their binding and enzymatic activities, which is …
Defining a new nomenclature for the structures of active and inactive kinases
Targeting protein kinases is an important strategy for intervention in cancer. Inhibitors are
directed at the active conformation or a variety of inactive conformations. While attempts …
directed at the active conformation or a variety of inactive conformations. While attempts …
Assessing the performance of MM/PBSA and MM/GBSA methods. 5. Improved docking performance using high solute dielectric constant MM/GBSA and MM/PBSA …
With the rapid development of computational techniques and hardware, more rigorous and
precise theoretical models have been used to predict the binding affinities of a large number …
precise theoretical models have been used to predict the binding affinities of a large number …
Validation of ITD mutations in FLT3 as a therapeutic target in human acute myeloid leukaemia
Effective targeted cancer therapeutic development depends upon distinguishing disease-
associated 'driver'mutations, which have causative roles in malignancy pathogenesis, from …
associated 'driver'mutations, which have causative roles in malignancy pathogenesis, from …
[HTML][HTML] An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor
The mechanism by which the epidermal growth factor receptor (EGFR) is activated upon
dimerization has eluded definition. We find that the EGFR kinase domain can be activated …
dimerization has eluded definition. We find that the EGFR kinase domain can be activated …
Molecular biology of bcr-abl1–positive chronic myeloid leukemia
A Quintás-Cardama, J Cortes - Blood, The Journal of the …, 2009 - ashpublications.org
Chronic myeloid leukemia (CML) has been regarded as the paradigmatic example of a
malignancy defined by a unique molecular event, the BCR-ABL1 oncogene. Decades of …
malignancy defined by a unique molecular event, the BCR-ABL1 oncogene. Decades of …
Surface comparison of active and inactive protein kinases identifies a conserved activation mechanism
AP Kornev, NM Haste, SS Taylor… - Proceedings of the …, 2006 - pnas.org
The surface comparison of different serine–threonine and tyrosine kinases reveals a set of
30 residues whose spatial positions are highly conserved. The comparison between active …
30 residues whose spatial positions are highly conserved. The comparison between active …