Describing the connectivity of chemical and/or biological systems using networks is a
straight gate for the introduction of mathematical tools in proteomics. Networks, in some …

This review article is, in a way, different from traditional review articles in that, besides being
informative and reporting on the past published work in the area of graphical representation …

Introduction of graphic representation for biological sequences can provide intuitive overall
pictures as well as useful insights for performing large-scale analysis. Here, a new two …

Based on a selected pair of physicochemical properties of amino acids, we propose a new
2D graphical representation of protein sequence, which may reflect the innate structure of …

After reviewing the field of graphical bioinformatics, we have selected two dozen of the most
significant publications that represent milestones of graphical bioinformatics. These …

A 2-D graphical representation of proteins based on 2-D map of amino acids is outlined. The
amino acid map was obtained by constructing the partial order on a selected pair of physico …

On the basis of a selected pair of physicochemical properties of amino acids, we introduce a
dynamic 2D graphical representation of protein sequences. Then, we introduce and …

To arrive at graphical representations of proteins one is confronted with number of arbitrary
decisions how to assign the 20 natural amino acids to equivalent or non-equivalent sites of …

A new method of comparison of protein sequences has been formulated. The sequence of
amino acids is represented by a set of point masses in a 20D space. The distribution of …

Abstract A (two‐dimensional) 2D graphical representation of protein sequences based on
six physicochemical properties of amino acids is outlined. The numerical characterization of …