[HTML][HTML] Extracting medical information from free-text and unstructured patient-generated health data using natural language processing methods: feasibility study with …

E Sezgin, SA Hussain, S Rust… - JMIR Formative …, 2023 - formative.jmir.org
Background Patient-generated health data (PGHD) captured via smart devices or digital
health technologies can reflect an individual health journey. PGHD enables tracking and …

Grammar-constrained decoding for structured information extraction with fine-tuned generative models applied to clinical trial abstracts

DM Schmidt, P Cimiano - Frontiers in Artificial Intelligence, 2025 - frontiersin.org
Background In the field of structured information extraction, there are typically semantic and
syntactic constraints on the output of information extraction (IE) systems. These constraints …

Advancing machine learning with OCR2SEQ: an innovative approach to multi-modal data augmentation

M Lowe, JD Prusa, JL Leevy, TM Khoshgoftaar - Journal of Big Data, 2024 - Springer
OCR2SEQ represents an innovative advancement in Optical Character Recognition (OCR)
technology, leveraging a multi-modal generative augmentation strategy to overcome …

Retrieve-and-Rank End-to-End Summarization of Biomedical Studies

G Moro, L Ragazzi, L Valgimigli, L Molfetta - International Conference on …, 2023 - Springer
An arduous biomedical task involves condensing evidence derived from multiple
interrelated studies, given a context as input, to generate reviews or provide answers …

Comparing generative and extractive approaches to information extraction from abstracts describing randomized clinical trials

C Witte, DM Schmidt, P Cimiano - Journal of Biomedical Semantics, 2024 - Springer
Abstract Background Systematic reviews of Randomized Controlled Trials (RCTs) are an
important part of the evidence-based medicine paradigm. However, the creation of such …

ADAPTIVE IE: Investigating the Complementarity of Human-AI Collaboration to Adaptively Extract Information on-the-fly

I Mondal, M Yuan, N Anandhavelu… - Proceedings of the …, 2025 - aclanthology.org
Abstract Information extraction (IE) needs vary over time, where a flexible information
extraction (IE) system can be useful. Despite this, existing IE systems are either fully …

A Knowledge-Enhanced Hierarchical Reinforcement Learning-Based Dialogue System for Automatic Disease Diagnosis

Y Zhu, Y Li, Y Cui, T Zhang, D Wang, Y Zhang, S Feng - Electronics, 2023 - mdpi.com
Deep Reinforcement Learning is a key technology for the diagnosis-oriented medical
dialogue system, determining the type of disease according to the patient's utterances. The …

InteractiveIE: Towards Assessing the Strength of Human-AI Collaboration in Improving the Performance of Information Extraction

I Mondal, M Yuan, A Garimella, F Ferraro… - ar** Review of Datasets and Models
J Bardhan, K Roberts, DZ Wang - Journal of Medical Internet Research, 2024 - jmir.org
Background Question answering (QA) systems for patient-related data can assist both
clinicians and patients. They can, for example, assist clinicians in decision-making and …

Intra-template entity compatibility based slot-filling for clinical trial information extraction

C Witte, P Cimiano - Proceedings of the 21st Workshop on …, 2022 - aclanthology.org
We present a deep learning based information extraction system that can extract the design
and results of a published abstract describing a Randomized Controlled Trial (RCT). In …