Assessing affective state in laboratory rodents to promote animal welfare—what is the progress in applied refinement research?

P Jirkof, J Rudeck, L Lewejohann - Animals, 2019 - mdpi.com
Simple Summary In the past, there was a strong focus on avoiding or reducing negative
animal welfare in animal experimentation. Recently, the importance of promoting positive …

CATER: combined animal tracking & environment reconstruction

L Haalck, M Mangan, A Wystrach, L Clement… - Science …, 2023 - science.org
Quantifying the behavior of small animals traversing long distances in complex
environments is one of the most difficult tracking scenarios for computer vision. Tiny and low …

OptiMouse: a comprehensive open source program for reliable detection and analysis of mouse body and nose positions

Y Ben-Shaul - BMC biology, 2017 - Springer
Background Accurate determination of mouse positions from video data is crucial for various
types of behavioral analyses. While detection of body positions is straightforward, the correct …

Automated classification of self-grooming in mice using open-source software

BJG van den Boom, P Pavlidi, CJH Wolf… - Journal of neuroscience …, 2017 - Elsevier
Background Manual analysis of behavior is labor intensive and subject to inter-rater
variability. Although considerable progress in automation of analysis has been made …

Ayahuasca, a psychedelic beverage, modulates neuroplasticity induced by ethanol in mice

CAF Almeida, AA Pereira-Junior, JG Rangel… - Behavioural Brain …, 2022 - Elsevier
Alcohol use disorder needs more effective treatments because relapse rates remain high.
Psychedelics, such as ayahuasca, have been used to treat substance use disorders. Our …

Visual tracking of small animals in cluttered natural environments using a freely moving camera

B Risse, M Mangan, L Del Pero… - Proceedings of the …, 2017 - openaccess.thecvf.com
Image-based tracking of animals in their natural habitats can provide rich behavioural data,
but is very challenging due to complex and dynamic background and target appearances …

MouBeAT: a new and open toolbox for guided analysis of behavioral tests in mice

E Bello-Arroyo, H Roque, A Marcos… - Frontiers in behavioral …, 2018 - frontiersin.org
Animal behavioral tests are essential to understand the bases of neurologic and
psychological disorders, which can be evaluated by different methodological and …

Rodent arena tracker (rat): a machine vision rodent tracking camera and closed loop control system

J Krynitsky, AA Legaria, JJ Pai, M Garmendia-Cedillos… - Eneuro, 2020 - eneuro.org
Video tracking is an essential tool in rodent research. Here, we demonstrate a machine
vision rodent tracking camera based on a low-cost, open-source, machine vision camera …

Automated analysis of stroke mouse trajectory data with Traja

J Shenk, KJ Lohkamp, M Wiesmann… - Frontiers in …, 2020 - frontiersin.org
Quantitative characterization of mouse activity, locomotion and walking patterns requires the
monitoring of position and activity over long periods of time. Manual behavioral phenoty** …

Neuronal glutamate transporters control dopaminergic signaling and compulsive behaviors

S Bellini, KE Fleming, M De, JP McCauley… - Journal of …, 2018 - jneurosci.org
There is an ongoing debate on the contribution of the neuronal glutamate transporter
EAAC1 to the onset of compulsive behaviors. Here, we used behavioral …