Genetic diversity and conservation units: dealing with the species-population continuum in the age of genomics

DJ Coates, M Byrne, C Moritz - Frontiers in Ecology and Evolution, 2018 - frontiersin.org
Current approaches to biodiversity conservation are largely based on geographic areas,
ecosystems, ecological communities, and species, with less attention on genetic diversity …

Machine learning for the study of plankton and marine snow from images

JO Irisson, SD Ayata, DJ Lindsay… - Annual Review of …, 2022 - annualreviews.org
Quantitative imaging instruments produce a large number of images of plankton and marine
snow, acquired in a controlled manner, from which the visual characteristics of individual …

[HTML][HTML] Assessment of scientific gaps related to the effective environmental management of deep-seabed mining

DJ Amon, S Gollner, T Morato, CR Smith, C Chen… - Marine Policy, 2022 - Elsevier
A comprehensive understanding of the deep-sea environment and mining's likely impacts is
necessary to assess whether and under what conditions deep-seabed mining operations …

Convergence of dominance and neglect in flying insect diversity

A Srivathsan, Y Ang, JM Heraty, WS Hwang… - Nature ecology & …, 2023 - nature.com
Most of arthropod biodiversity is unknown to science. Consequently, it has been unclear
whether insect communities around the world are dominated by the same or different taxa …

Counting animal species with DNA barcodes: Canadian insects

PDN Hebert, S Ratnasingham… - … of the Royal …, 2016 - royalsocietypublishing.org
Recent estimates suggest that the global insect fauna includes fewer than six million
species, but this projection is very uncertain because taxonomic work has been limited on …

Species in lichen-forming fungi: balancing between conceptual and practical considerations, and between phenotype and phylogenomics

R Lücking, SD Leavitt, DL Hawksworth - Fungal Diversity, 2021 - Springer
Lichens are symbiotic associations resulting from interactions among fungi (primary and
secondary mycobionts), algae and/or cyanobacteria (primary and secondary photobionts) …

Future of DNA-based insect monitoring

PYS Chua, SJ Bourlat, C Ferguson, P Korlevic, L Zhao… - Trends in Genetics, 2023 - cell.com
Insects are crucial for ecosystem health but climate change and pesticide use are driving
massive insect decline. To mitigate this loss, we need new and effective monitoring …

Towards large-scale integrative taxonomy (LIT): resolving the data conundrum for dark taxa

E Hartop, A Srivathsan, F Ronquist… - Systematic Biology, 2022 - academic.oup.com
Abstract New, rapid, accurate, scalable, and cost-effective species discovery and
delimitation methods are needed for tackling “dark taxa,” here defined as groups for which …

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

KR Bradnam, JN Fass, A Alexandrov, P Baranay… - …, 2013 - academic.oup.com
Background The process of generating raw genome sequence data continues to become
cheaper, faster, and more accurate. However, assembly of such data into high-quality …

DNA barcode‐based delineation of putative species: efficient start for taxonomic workflows

M Kekkonen, PDN Hebert - Molecular ecology resources, 2014 - Wiley Online Library
The analysis of DNA barcode sequences with varying techniques for cluster recognition
provides an efficient approach for recognizing putative species (operational taxonomic units …