A survey on deep learning in medical image registration: New technologies, uncertainty, evaluation metrics, and beyond

J Chen, Y Liu, S Wei, Z Bian, S Subramanian… - Medical Image …, 2024 - Elsevier
Deep learning technologies have dramatically reshaped the field of medical image
registration over the past decade. The initial developments, such as regression-based and U …

The multimodal brain tumor image segmentation benchmark (BRATS)

BH Menze, A Jakab, S Bauer… - IEEE transactions on …, 2014 - ieeexplore.ieee.org
In this paper we report the set-up and results of the Multimodal Brain Tumor Image
Segmentation Benchmark (BRATS) organized in conjunction with the MICCAI 2012 and …

An improved neuroanatomical model of the default-mode network reconciles previous neuroimaging and neuropathological findings

PN Alves, C Foulon, V Karolis, D Bzdok… - Communications …, 2019 - nature.com
The brain is constituted of multiple networks of functionally correlated brain areas, out of
which the default-mode network (DMN) is the largest. Most existing research into the DMN …

QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

M Cieslak, PA Cook, X He, FC Yeh, T Dhollander… - Nature …, 2021 - nature.com
Diffusion-weighted magnetic resonance imaging (dMRI) is the primary method for
noninvasively studying the organization of white matter in the human brain. Here we …

Statistical harmonization corrects site effects in functional connectivity measurements from multi‐site fMRI data

M Yu, KA Linn, PA Cook, ML Phillips… - Human brain …, 2018 - Wiley Online Library
Acquiring resting‐state functional magnetic resonance imaging (fMRI) datasets at multiple
MRI scanners and clinical sites can improve statistical power and generalizability of results …

A parameter-efficient deep learning approach to predict conversion from mild cognitive impairment to Alzheimer's disease

S Spasov, L Passamonti, A Duggento, P Lio, N Toschi… - Neuroimage, 2019 - Elsevier
Some forms of mild cognitive impairment (MCI) are the clinical precursors of Alzheimer's
disease (AD), while other MCI types tend to remain stable over-time and do not progress to …

A high-resolution probabilistic in vivo atlas of human subcortical brain nuclei

WM Pauli, AN Nili, JM Tyszka - Scientific data, 2018 - nature.com
Recent advances in magnetic resonance imaging methods, including data acquisition, pre-
processing and analysis, have benefited research on the contributions of subcortical brain …

Multi-atlas segmentation of biomedical images: a survey

JE Iglesias, MR Sabuncu - Medical image analysis, 2015 - Elsevier
Abstract Multi-atlas segmentation (MAS), first introduced and popularized by the pioneering
work of Rohlfing, et al.(2004), Klein, et al.(2005), and Heckemann, et al.(2006), is becoming …

Development of large-scale functional networks from birth to adulthood: A guide to the neuroimaging literature

DS Grayson, DA Fair - Neuroimage, 2017 - Elsevier
The development of human cognition results from the emergence of coordinated activity
between distant brain areas. Network science, combined with non-invasive functional …

Glia accumulate evidence that actions are futile and suppress unsuccessful behavior

Y Mu, DV Bennett, M Rubinov, S Narayan, CT Yang… - Cell, 2019 - cell.com
When a behavior repeatedly fails to achieve its goal, animals often give up and become
passive, which can be strategic for preserving energy or regrou** between attempts. It is …