Prediction of post‐translational glycosylation and phosphorylation of proteins from the amino acid sequence

N Blom, T Sicheritz‐Pontén, R Gupta… - …, 2004 - Wiley Online Library
Post‐translational modifications (PTMs) occur on almost all proteins analyzed to date. The
function of a modified protein is often strongly affected by these modifications and therefore …

Concepts and principles of O-linked glycosylation

PV Steen, PM Rudd, RA Dwek… - Critical reviews in …, 1998 - Taylor & Francis
The biosynthesis, structures, and functions of O-glycosylation, as a complex
posttranslational event, is reviewed and compared for the various types of O-glycans. Mucin …

A new class of membrane-bound chemokine with a CX3C motif

JF Bazan, KB Bacon, G Hardiman, W Wang, K Soo… - Nature, 1997 - nature.com
Chemokines direct the trafficking of white blood cells in immune surveillance, playing a key
role in inflammatory and infectious diseases such as AIDS1–5. All chemokines studied so far …

[BOOK][B] Bioinformatics: the machine learning approach

P Baldi, S Brunak - 2001 - books.google.com
A guide to machine learning approaches and their application to the analysis of biological
data. An unprecedented wealth of data is being generated by genome sequencing projects …

Prediction of glycosylation across the human proteome and the correlation to protein function

R Gupta, S Brunak - Biocomputing 2002, 2001 - World Scientific
Prediction of glycosylation across the human proteome and the correlation to protein
function Ramneek Gupta and S0ren Brunak Cen Page 1 Prediction of glycosylation across …

Pendred syndrome is caused by mutations in a putative sulphate transporter gene (PDS)

LA Everett, B Glaser, JC Beck, JR Idol, A Buchs… - Nature …, 1997 - nature.com
Pendred syndrome is a recessively inherited disorder with the hallmark features of
congenital deafness and thyroid goitre. By some estimates, the disorder may account for …

Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites

K Julenius, A Mølgaard, R Gupta, S Brunak - Glycobiology, 2005 - academic.oup.com
O-GalNAc-glycosylation is one of the main types of glycosylation in mammalian cells. No
consensus recognition sequence for the O-glycosyltransferases is known, making prediction …

Molecular cloning of the CA125 ovarian cancer antigen: identification as a new mucin, MUC16

BWT Yin, KO Lloyd - Journal of Biological Chemistry, 2001 - ASBMB
CA125 is an ovarian cancer antigen that is the basis for a widely used serum assay for the
monitoring of patients with ovarian cancer; however, detailed information on its biochemical …

Particle swarm optimization for traveling salesman problem

KP Wang, L Huang, CG Zhou… - Proceedings of the 2003 …, 2003 - ieeexplore.ieee.org
This paper proposes a new application of particle swarm optimization for traveling salesman
problem. We have developed some special methods for solving TSP using PSO. We have …

Molecular cloning of NKp46: a novel member of the immunoglobulin superfamily involved in triggering of natural cytotoxicity

A Pessino, S Sivori, C Bottino, A Malaspina… - The Journal of …, 1998 - rupress.org
NKp46 has been shown to represent a novel, natural killer (NK) cell–specific surface
molecule, involved in human NK cell activation. In this study, we further analyzed the role of …