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Pedigree-based and phylogenetic methods support surprising patterns of mutation rate and spectrum in the gray mouse lemur
Mutations are the raw material on which evolution acts, and knowledge of their frequency
and genomic distribution is crucial for understanding how evolution operates at both long …
and genomic distribution is crucial for understanding how evolution operates at both long …
RecGraph: recombination-aware alignment of sequences to variation graphs
Motivation Bacterial genomes present more variability than human genomes, which requires
important adjustments in computational tools that are developed for human data. In …
important adjustments in computational tools that are developed for human data. In …
The challenge and promise of estimating the de novo mutation rate from whole‐genome comparisons among closely related individuals
Germline mutations are the raw material for natural selection, driving species evolution and
the generation of earth's biodiversity. Without this driver of genetic diversity, life on earth …
the generation of earth's biodiversity. Without this driver of genetic diversity, life on earth …
A proteomic glimpse into the effect of antimalarial drugs on Plasmodium falciparum proteome towards highlighting possible therapeutic targets
M Dousti, R Manzano-Román, S Rashidi… - Pathogens and …, 2021 - academic.oup.com
There is no effective vaccine against malaria; therefore, chemotherapy is to date the only
choice to fight against this infectious disease. However, there is growing evidences of drug …
choice to fight against this infectious disease. However, there is growing evidences of drug …
[HTML][HTML] Role for gene conversion in the evolution of cell-surface antigens of the malaria parasite Plasmodium falciparum
While the malaria parasite Plasmodium falciparum has low average genome-wide diversity
levels, likely due to its recent introduction from a gorilla-infecting ancestor (approximately …
levels, likely due to its recent introduction from a gorilla-infecting ancestor (approximately …
Sequential motifs in observed walks
The structure of complex networks can be characterized by counting and analysing network
motifs. Motifs are small graph structures that occur repeatedly in a network, such as triangles …
motifs. Motifs are small graph structures that occur repeatedly in a network, such as triangles …
[HTML][HTML] Evidence for linkage of pfmdr1, pfcrt, and pfk13 polymorphisms to lumefantrine and mefloquine susceptibilities in a Plasmodium falciparum cross
Background Lumefantrine and mefloquine are used worldwide in artemisinin-based
combination therapy (ACT) of malaria. Better understanding of drug susceptibility and …
combination therapy (ACT) of malaria. Better understanding of drug susceptibility and …
Gene conversion drives allelic dimorphism in two paralogous surface antigens of the malaria parasite P. falciparum
While the malaria parasite P. falciparum has low average genome-wide diversity levels,
likely due to its recent introduction from a gorilla-infecting ancestor (∼ 10,000-50,000 years …
likely due to its recent introduction from a gorilla-infecting ancestor (∼ 10,000-50,000 years …
[SÁCH][B] Large-Scale Analysis of Population Structural Variants Using Terabytes of SRA Sequencing Data
M Shokrof - 2024 - search.proquest.com
Studying structural variants (SV) in populations is crucial since they cause more diversity
and have more effects on gene function than small variants. However, population scale …
and have more effects on gene function than small variants. However, population scale …
Whole-Exome Sequencing Implicates the USP34 rs777591A > G Intron Variant in Chronic Obstructive Pulmonary Disease in a Kashi Cohort
J Xu, L Li, J Ren, X Zhong, C **e, A Zheng… - Frontiers in Cell and …, 2022 - frontiersin.org
Genetic factors are important factors in chronic obstructive pulmonary disease (COPD)
onset. Plenty of risk and new causative genes for COPD have been identified in patients of …
onset. Plenty of risk and new causative genes for COPD have been identified in patients of …