Twenty-five years of quantitative PCR for gene expression analysis

HD VanGuilder, KE Vrana, WM Freeman - Biotechniques, 2008 - Taylor & Francis
Following its invention 25 years ago, PCR has been adapted for numerous molecular
biology applications. Gene expression analysis by reverse-transcription quantitative PCR …

Efficiency correction is required for accurate quantitative PCR analysis and reporting

JM Ruijter, RJ Barnewall, IB Marsh… - Clinical …, 2021 - academic.oup.com
Abstract Background Quantitative PCR (qPCR) aims to measure the DNA or RNA
concentration in diagnostic and biological samples based on the quantification cycle (Cq) …

An improvement of the 2ˆ (–delta delta CT) method for quantitative real-time polymerase chain reaction data analysis

X Rao, X Huang, Z Zhou, X Lin - Biostatistics, bioinformatics …, 2013 - pmc.ncbi.nlm.nih.gov
Background The 2-ΔΔCT method has been extensively used as a relative quantification
strategy for quantitative real-time polymerase chain reaction (qPCR) data analysis. This …

Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data

JM Ruijter, C Ramakers, WMH Hoogaars… - Nucleic acids …, 2009 - academic.oup.com
Despite the central role of quantitative PCR (qPCR) in the quantification of mRNA
transcripts, most analyses of qPCR data are still delegated to the software that comes with …

Web-based LinRegPCR: application for the visualization and analysis of (RT)-qPCR amplification and melting data

A Untergasser, JM Ruijter, V Benes… - BMC …, 2021 - Springer
Background The analyses of amplification and melting curves have been shown to provide
valuable information on the quality of the individual reactions in quantitative PCR (qPCR) …

The role of nuclear lamin B1 in cell proliferation and senescence

T Shimi, V Butin-Israeli, SA Adam… - Genes & …, 2011 - genesdev.cshlp.org
Nuclear lamin B1 (LB1) is a major structural component of the nucleus that appears to be
involved in the regulation of many nuclear functions. The results of this study demonstrate …

Merkel cells transduce and encode tactile stimuli to drive Aβ-afferent impulses

R Ikeda, M Cha, J Ling, Z Jia, D Coyle, JG Gu - Cell, 2014 - cell.com
Sensory systems for detecting tactile stimuli have evolved from touch-sensing nerves in
invertebrates to complicated tactile end organs in mammals. Merkel discs are tactile end …

Telomere length and risk of incident cancer and cancer mortality

P Willeit, J Willeit, A Mayr, S Weger, F Oberhollenzer… - Jama, 2010 - jamanetwork.com
Context Telomeres are essential to preserve the integrity of the genome. Critically short
telomeres lead to replicative cell senescence and chromosomal instability and may thereby …

[HTML][HTML] Tunable supramolecular hydrogels for selection of lineage-guiding metabolites in stem cell cultures

EV Alakpa, V Jayawarna, A Lampel, KV Burgess… - Chem, 2016 - cell.com
Stem cells are known to differentiate in response to the chemical and mechanical properties
of the substrates on which they are cultured. Thus, supramolecular biomaterials with tunable …

Comparing the normalization methods for the differential analysis of Illumina high-throughput RNA-Seq data

P Li, Y Piao, HS Shon, KH Ryu - BMC bioinformatics, 2015 - Springer
Background Recently, rapid improvements in technology and decrease in sequencing costs
have made RNA-Seq a widely used technique to quantify gene expression levels. Various …