Structural biology of CRISPR–Cas immunity and genome editing enzymes

JY Wang, P Pausch, JA Doudna - Nature Reviews Microbiology, 2022 - nature.com
CRISPR–Cas systems provide resistance against foreign mobile genetic elements and have
a wide range of genome editing and biotechnological applications. In this Review, we …

Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants

KS Makarova, YI Wolf, J Iranzo, SA Shmakov… - Nature Reviews …, 2020 - nature.com
The number and diversity of known CRISPR–Cas systems have substantially increased in
recent years. Here, we provide an updated evolutionary classification of CRISPR–Cas …

The widespread IS200/IS605 transposon family encodes diverse programmable RNA-guided endonucleases

H Altae-Tran, S Kannan, FE Demircioglu, R Oshiro… - Science, 2021 - science.org
IscB proteins are putative nucleases encoded in a distinct family of IS200/IS605 transposons
and are likely ancestors of the RNA-guided endonuclease Cas9, but the functions of IscB …

Systematic discovery of antiphage defense systems in the microbial pangenome

S Doron, S Melamed, G Ofir, A Leavitt, A Lopatina… - Science, 2018 - science.org
INTRODUCTION Bacteria and archaea are frequently attacked by viruses (phages) and as a
result have developed multiple, sophisticated lines of active defense that can collectively be …

Diversity, classification and evolution of CRISPR-Cas systems

EV Koonin, KS Makarova, F Zhang - Current opinion in microbiology, 2017 - Elsevier
Highlights•Two classes of CRISPR-Cas systems differ by the architectures of effector
modules.•Effectors of Class 2 CRISPR-Cas systems are large, multidomain proteins.•Effector …

Origins and evolution of CRISPR-Cas systems

EV Koonin, KS Makarova - Philosophical Transactions of …, 2019 - royalsocietypublishing.org
CRISPR-Cas, the bacterial and archaeal adaptive immunity systems, encompass a complex
machinery that integrates fragments of foreign nucleic acids, mostly from mobile genetic …

History of CRISPR-Cas from encounter with a mysterious repeated sequence to genome editing technology

Y Ishino, M Krupovic, P Forterre - Journal of bacteriology, 2018 - Am Soc Microbiol
Clustered regularly interspaced short palindromic repeat (CRISPR)-Cas systems are well-
known acquired immunity systems that are widespread in archaea and bacteria. The RNA …

An updated evolutionary classification of CRISPR–Cas systems

KS Makarova, YI Wolf, OS Alkhnbashi… - Nature reviews …, 2015 - nature.com
The evolution of CRISPR–cas loci, which encode adaptive immune systems in archaea and
bacteria, involves rapid changes, in particular numerous rearrangements of the locus …

Transposon-encoded nucleases use guide RNAs to promote their selfish spread

C Meers, HC Le, SR Pesari, FT Hoffmann… - Nature, 2023 - nature.com
Insertion sequences are compact and pervasive transposable elements found in bacteria,
which encode only the genes necessary for their mobilization and maintenance. IS200-and …

[HTML][HTML] Discovery and functional characterization of diverse class 2 CRISPR-Cas systems

S Shmakov, OO Abudayyeh, KS Makarova, YI Wolf… - Molecular cell, 2015 - cell.com
Microbial CRISPR-Cas systems are divided into Class 1, with multisubunit effector
complexes, and Class 2, with single protein effectors. Currently, only two Class 2 effectors …