Chloroplast genomes: diversity, evolution, and applications in genetic engineering
Chloroplasts play a crucial role in sustaining life on earth. The availability of over 800
sequenced chloroplast genomes from a variety of land plants has enhanced our …
sequenced chloroplast genomes from a variety of land plants has enhanced our …
Structural diversity among plastid genomes of land plants
The plastome of land plants is often considered to be highly conserved in sequence,
structure, and content. This is particularly true for nonvascular land plants, for which few …
structure, and content. This is particularly true for nonvascular land plants, for which few …
Targeted base editing in the plastid genome of Arabidopsis thaliana
Bacterial cytidine deaminase fused to the DNA binding domains of transcription activator-
like effector nucleases was recently reported to transiently substitute a targeted C to a T in …
like effector nucleases was recently reported to transiently substitute a targeted C to a T in …
Complete chloroplast genomes provide insights into evolution and phylogeny of Zingiber (Zingiberaceae)
D Jiang, X Cai, M Gong, M **a, H **ng, S Dong, S Tian… - BMC genomics, 2023 - Springer
Abstract Background The genus Zingiber of the Zingiberaceae is distributed in tropical,
subtropical, and in Far East Asia. This genus contains about 100–150 species, with many …
subtropical, and in Far East Asia. This genus contains about 100–150 species, with many …
The chloroplast genome evolution of Venus slipper (Paphiopedilum): IR expansion, SSC contraction, and highly rearranged SSC regions
YY Guo, JX Yang, MZ Bai, GQ Zhang, ZJ Liu - BMC Plant Biology, 2021 - Springer
Background Paphiopedilum is the largest genus of slipper orchids. Previous studies showed
that the phylogenetic relationships of this genus are not well resolved, and sparse taxon …
that the phylogenetic relationships of this genus are not well resolved, and sparse taxon …
Plastid phylogenomic insights into the evolution of Caryophyllales
The Caryophyllales includes 40 families and 12,500 species, representing a large and
diverse clade of angiosperms. Collectively, members of the clade grow on all continents and …
diverse clade of angiosperms. Collectively, members of the clade grow on all continents and …
Backbone phylogeny and evolution of Apioideae (Apiaceae): New insights from phylogenomic analyses of plastome data
J Wen, DF **e, M Price, T Ren, YQ Deng, LJ Gui… - Molecular Phylogenetics …, 2021 - Elsevier
Traditional phylogenies inferred from chloroplast DNA fragments have not obtained a well‐
resolved evolutionary history for the backbone of Apioideae, the largest subfamily of …
resolved evolutionary history for the backbone of Apioideae, the largest subfamily of …
MSH1 is required for maintenance of the low mutation rates in plant mitochondrial and plastid genomes
Mitochondrial and plastid genomes in land plants exhibit some of the slowest rates of
sequence evolution observed in any eukaryotic genome, suggesting an exceptional ability …
sequence evolution observed in any eukaryotic genome, suggesting an exceptional ability …
Comparative chloroplast genome analyses of Avena: insights into evolutionary dynamics and phylogeny
Q Liu, X Li, M Li, W Xu, T Schwarzacher… - BMC plant biology, 2020 - Springer
Abstract Background Oat (Avena sativa L.) is a recognized health-food, and the contributions
of its different candidate A-genome progenitor species remain inconclusive. Here, we report …
of its different candidate A-genome progenitor species remain inconclusive. Here, we report …
A Repertory of Rearrangements and the Loss of an Inverted Repeat Region in Passiflora Chloroplast Genomes
LA Cauz-Santos, ZP da Costa, C Callot… - Genome biology and …, 2020 - academic.oup.com
Chloroplast genomes (cpDNA) in angiosperms are usually highly conserved. Although
rearrangements have been observed in some lineages, such as Passiflora, the mechanisms …
rearrangements have been observed in some lineages, such as Passiflora, the mechanisms …