Enhancing genetic gain through genomic selection: from livestock to plants

Y Xu, X Liu, J Fu, H Wang, J Wang, C Huang… - Plant …, 2020 - cell.com
Although long-term genetic gain has been achieved through increasing use of modern
breeding methods and technologies, the rate of genetic gain needs to be accelerated to …

Application of genomic big data in plant breeding: Past, present, and future

KD Kim, Y Kang, C Kim - Plants, 2020 - mdpi.com
Plant breeding has a long history of develo** new varieties that have ensured the food
security of the human population. During this long journey together with humanity, plant …

Genetic architecture of quantitative traits in beef cattle revealed by genome wide association studies of imputed whole genome sequence variants: I: feed efficiency …

F Zhang, Y Wang, R Mukiibi, L Chen, M Vinsky… - BMC genomics, 2020 - Springer
Background Genome wide association studies (GWAS) on residual feed intake (RFI) and its
component traits including daily dry matter intake (DMI), average daily gain (ADG), and …

Genetic Diversity and Signatures of Selection for Thermal Stress in Cattle and Other Two Bos Species Adapted to Divergent Climatic Conditions

PHF Freitas, Y Wang, P Yan, HR Oliveira… - Frontiers in …, 2021 - frontiersin.org
Understanding the biological mechanisms of climatic adaptation is of paramount importance
for the optimization of breeding programs and conservation of genetic resources. The aim of …

A gene-set enrichment and protein–protein interaction network-based GWAS with regulatory SNPs identifies candidate genes and pathways associated with carcass …

K Srikanth, SH Lee, KY Chung, JE Park, GW Jang… - Genes, 2020 - mdpi.com
Non-synonymous SNPs and protein coding SNPs within the promoter region of genes
(regulatory SNPs) might have a significant effect on carcass traits. Imputed sequence level …

Use of gene expression and whole-genome sequence information to improve the accuracy of genomic prediction for carcass traits in Hanwoo cattle

S de Las Heras-Saldana, BI Lopez… - Genetics Selection …, 2020 - Springer
Background In this study, we assessed the accuracy of genomic prediction for carcass
weight (CWT), marbling score (MS), eye muscle area (EMA) and back fat thickness (BFT) in …

Genome-wide association study to identify QTL for carcass traits in Korean Hanwoo cattle

MZ Alam, MA Haque, A Iqbal, YM Lee, JJ Ha, S **… - Animals, 2023 - mdpi.com
Simple Summary Genome-wide association study (GWAS) is a widely used approach to
identify genetic variants and genomic regions associated with phenotypes. However, there …

Genetic insights in pearl millet breeding in the genomic era: challenges and prospects

M Singh, U Nara - Plant Biotechnology Reports, 2023 - Springer
Pearl millet, a vital staple food and an important cereal, is emerging as crop having various
end-uses as feed, food as well as fodder. Advancement in high-throughput sequencing …

The utility of genomic prediction models in evolutionary genetics

SE McGaugh, AJ Lorenz… - Proceedings of the …, 2021 - royalsocietypublishing.org
Variation in complex traits is the result of contributions from many loci of small effect. Based
on this principle, genomic prediction methods are used to make predictions of breeding …

[HTML][HTML] Genomic prediction of leaf rust resistance to Arabica coffee using machine learning algorithms

IC Sousa, M Nascimento, GN Silva… - Scientia …, 2020 - SciELO Brasil
Genomic selection (GS) emphasizes the simultaneous prediction of the genetic effects of
thousands of scattered markers over the genome. Several statistical methodologies have …