Peptidyl-prolyl cis-trans isomerases, a superfamily of ubiquitous folding catalysts

SF Göthel, MA Marahiel - Cellular and molecular life sciences CMLS, 1999 - Springer
Cyclosporine A therapy for prophylaxis against graft rejection revolutionized human organ
transplantation. The immunosuppressant drugs cyclosporin A (CsA), FK506 and rapamycin …

Molecular recognition of protein− ligand complexes: Applications to drug design

RE Babine, SL Bender - Chemical reviews, 1997 - ACS Publications
Advances in molecular biology have had a dramatic impact on the drug discovery process.
1, 2 The ability to produce recombinant proteins of biological significance has greatly …

Cas1–Cas2 complex formation mediates spacer acquisition during CRISPR–Cas adaptive immunity

JK Nuñez, PJ Kranzusch, J Noeske, AV Wright… - Nature structural & …, 2014 - nature.com
The initial stage of CRISPR–Cas immunity involves the integration of foreign DNA spacer
segments into the host genomic CRISPR locus. The nucleases Cas1 and Cas2 are the only …

Structural basis for DNA damage–dependent poly (ADP-ribosyl) ation by human PARP-1

MF Langelier, JL Planck, S Roy, JM Pascal - Science, 2012 - science.org
Poly (ADP-ribose) polymerase–1 (PARP-1)(ADP, adenosine diphosphate) has a modular
domain architecture that couples DNA damage detection to poly (ADP-ribosyl) ation activity …

Development and validation of a genetic algorithm for flexible docking

G Jones, P Willett, RC Glen, AR Leach… - Journal of molecular …, 1997 - Elsevier
Prediction of small molecule binding modes to macromolecules of known three-dimensional
structure is a problem of paramount importance in rational drug design (the “docking” …

Degradation of complex arabinoxylans by human colonic Bacteroidetes

GV Pereira, AM Abdel-Hamid, S Dutta… - Nature …, 2021 - nature.com
Some Bacteroidetes and other human colonic bacteria can degrade arabinoxylans, common
polysaccharides found in dietary fiber. Previous work has identified gene clusters …

Target identification using drug affinity responsive target stability (DARTS)

B Lomenick, R Hao, N Jonai, RM Chin… - Proceedings of the …, 2009 - pnas.org
Identifying the molecular targets for the beneficial or detrimental effects of small-molecule
drugs is an important and currently unmet challenge. We have developed a method, drug …

Structure of the FKBP12-rapamycin complex interacting with binding domain of human FRAP

J Choi, J Chen, SL Schreiber, J Clardy - Science, 1996 - science.org
Rapamycin, a potent immunosuppressive agent, binds two proteins: the FK506-binding
protein (FKBP12) and the FKBP-rapamycin-associated protein (FRAP). A crystal structure of …

Structural basis for nutrient acquisition by dominant members of the human gut microbiota

AJ Glenwright, KR Pothula, SP Bhamidimarri… - Nature, 2017 - nature.com
The human large intestine is populated by a high density of microorganisms, collectively
termed the colonic microbiota, which has an important role in human health and nutrition …

Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA

SD Bruner, DPG Norman, GL Verdine - nature, 2000 - nature.com
Spontaneous oxidation of guanine residues in DNA generates 8-oxoguanine (oxoG). By
mispairing with adenine during replication, oxoG gives rise to a G· C→ T· A transversion, a …