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Semantic similarity in biomedical ontologies
C Pesquita, D Faria, AO Falcao, P Lord… - PLoS computational …, 2009 - journals.plos.org
In recent years, ontologies have become a mainstream topic in biomedical research. When
biological entities are described using a common schema, such as an ontology, they can be …
biological entities are described using a common schema, such as an ontology, they can be …
Protein–protein interactions: detection, reliability assessment and applications
Protein–protein interactions (PPIs) participate in all important biological processes in living
organisms, such as catalyzing metabolic reactions, DNA replication, DNA transcription …
organisms, such as catalyzing metabolic reactions, DNA replication, DNA transcription …
[ספר][B] Semantic similarity from natural language and ontology analysis
Artificial Intelligence federates numerous scientific fields in the aim of develo** machines
able to assist human operators performing complex treatments---most of which demand high …
able to assist human operators performing complex treatments---most of which demand high …
Computational approaches for detecting protein complexes from protein interaction networks: a survey
Background Most proteins form macromolecular complexes to perform their biological
functions. However, experimentally determined protein complex data, especially of those …
functions. However, experimentally determined protein complex data, especially of those …
The ocean sampling day consortium
A Kopf, M Bicak, R Kottmann, J Schnetzer, I Kostadinov… - Gigascience, 2015 - Springer
Abstract Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial
Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine …
Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine …
Semantic similarity analysis of protein data: assessment with biological features and issues
The integration of proteomics data with biological knowledge is a recent trend in
bioinformatics. A lot of biological information is available and is spread on different sources …
bioinformatics. A lot of biological information is available and is spread on different sources …
A fast hierarchical clustering algorithm for functional modules discovery in protein interaction networks
As advances in the technologies of predicting protein interactions, huge data sets portrayed
as networks have been available. Identification of functional modules from such networks is …
as networks have been available. Identification of functional modules from such networks is …
[ספר][B] Protein interaction networks: computational analysis
A Zhang - 2009 - books.google.com
The analysis of protein-protein interactions is fundamental to the understanding of cellular
organization, processes, and functions. Recent large-scale investigations of protein-protein …
organization, processes, and functions. Recent large-scale investigations of protein-protein …
[ספר][B] Biomolecular networks: methods and applications in systems biology
Alternative techniques and tools for analyzing biomolecular networks With the recent rapid
advances in molecular biology, high-throughput experimental methods have resulted in …
advances in molecular biology, high-throughput experimental methods have resulted in …
Construction and application of dynamic protein interaction network based on time course gene expression data
In recent years, researchers have tried to inject dynamic information into static protein
interaction networks (PIN s). The paper first proposes a three‐sigma method to identify …
interaction networks (PIN s). The paper first proposes a three‐sigma method to identify …