Prospects and challenges of environmental DNA (eDNA) metabarcoding in mangrove restoration in Southeast Asia

AKS Wee, SG Salmo Iii, K Sivakumar… - Frontiers in Marine …, 2023 - frontiersin.org
Species detection using environmental DNA (eDNA) is a biomonitoring tool that can be
widely applied to mangrove restoration and management. Compared to traditional surveys …

Combining environmental DNA and visual surveys can inform conservation planning for coral reefs

D Muenzel, A Bani, M De Brauwer… - Proceedings of the …, 2024 - National Acad Sciences
Environmental DNA (eDNA) metabarcoding has the potential to revolutionize conservation
planning by providing spatially and taxonomically comprehensive data on biodiversity and …

Bridging the gaps through environmental DNA: A review of critical considerations for interpreting the biodiversity data in coral reef ecosystems

S Hassan, BS Bali, A Yaseen, M Zaman… - Marine Pollution …, 2024 - Elsevier
Coral reefs, the rainforests of the sea, are vital hotspots for marine biodiversity. However, the
persistent challenge of climate change directly threatens the delicate balance of coral reef …

Comparing eDNA metabarcoding and conventional pelagic netting to inform biodiversity monitoring in deep ocean environments

D Cote, B McClenaghan, J Desforges… - ICES Journal of …, 2023 - academic.oup.com
The performance of environmental DNA (eDNA) metabarcoding has rarely been evaluated
against conventional sampling methods in deep ocean mesopelagic environments. We …

Distinct coral reef habitat communities characterized by environmental DNA metabarcoding

L Dugal, L Thomas, A Meenakshisundaram, T Simpson… - Coral Reefs, 2023 - Springer
Coral reefs are biodiversity hotspots, places of high endemicity and provide essential
services to billions of people globally. With increasing threats to these reefs worldwide, there …

Pest Alert Tool—a web-based application for flagging species of concern in metabarcoding datasets

A Zaiko, M Scheel, J Schattschneider… - Nucleic Acids …, 2023 - academic.oup.com
Advances in high-throughput sequencing (HTS) technologies and their increasing
affordability have fueled environmental DNA (eDNA) metabarcoding data generation from …

[HTML][HTML] Progress and Promise for Science in Indonesia: Combining environmental DNA and visual surveys can inform conservation planning for coral reefs

D Muenzel, A Bani, M De Brauwer… - Proceedings of the …, 2024 - ncbi.nlm.nih.gov
Results Comparison of Species Detection. We surveyed 147 coral reef sites across the
Wallacea archipelago in Indonesia between June 2019 and April 2021 (Fig. 1A). At 46 sites …

[HTML][HTML] eDNA assessment of pelagic fish diversity, distribution, and abundance in the central Pacific Ocean

C Li, H Long, S Yang, Y Zhang, F Tang, W **… - Regional Studies in …, 2022 - Elsevier
In open ocean environment with rich biodiversity, the assessment of fish resources is critical
to the development of marine ecosystems and the sustainable use of resources …

Comparing anesthetic stations and environmental DNA sampling to determine community composition of cryptobenthic coral reef fishes of Vava'u, Kingdom of Tonga

MC Gómez-Buckley, R Gallego, V Arranz, T Halafihi… - Coral Reefs, 2023 - Springer
Cryptobenthic reef fishes (CRF) are an important component of coral reef communities that
are often overlooked, as their cryptic nature and very small size make them difficult to assess …

Diversity and distribution of Symbiodiniaceae detected on coral reefs of Lombok, Indonesia using environmental DNA metabarcoding

A Pratomo, DG Bengen, NP Zamani, C Lane… - PeerJ, 2022 - peerj.com
Background Dinoflagellates of family Symbiodiniaceae are important to coral reef
ecosystems because of their contribution to coral health and growth; however, only a few …