Kinetic basis for DNA target specificity of CRISPR-Cas12a
Class 2 CRISPR-Cas nucleases are programmable genome editing tools with promising
applications in human health and disease. However, DNA cleavage at off-target sites that …
applications in human health and disease. However, DNA cleavage at off-target sites that …
Real-time shape approximation and fingerprinting of single proteins using a nanopore
Established methods for characterizing proteins typically require physical or chemical
modification steps or cannot be used to examine individual molecules in solution. Ionic …
modification steps or cannot be used to examine individual molecules in solution. Ionic …
Single-molecule studies of protein folding with optical tweezers
Manipulation of individual molecules with optical tweezers provides a powerful means of
interrogating the structure and folding of proteins. Mechanical force is not only a relevant …
interrogating the structure and folding of proteins. Mechanical force is not only a relevant …
Statistically optimal analysis of samples from multiple equilibrium states
We present a new estimator for computing free energy differences and thermodynamic
expectations as well as their uncertainties from samples obtained from multiple equilibrium …
expectations as well as their uncertainties from samples obtained from multiple equilibrium …
Single reconstituted neuronal SNARE complexes zipper in three distinct stages
Soluble N-ethylmaleimide–sensitive factor attachment protein receptor (SNARE) proteins
drive membrane fusion by assembling into a four-helix bundle in a zippering process. Here …
drive membrane fusion by assembling into a four-helix bundle in a zippering process. Here …
Hidden dynamics in the unfolding of individual bacteriorhodopsin proteins
Protein folding occurs as a set of transitions between structural states within an energy
landscape. An oversimplified view of the folding process emerges when transiently …
landscape. An oversimplified view of the folding process emerges when transiently …
Optical tweezers study life under tension
Optical tweezers have become one of the primary weapons in the arsenal of biophysicists,
and have revolutionized the new field of single-molecule biophysics. Today's techniques …
and have revolutionized the new field of single-molecule biophysics. Today's techniques …
Single-molecule dissection of stacking forces in DNA
F Kilchherr, C Wachauf, B Pelz, M Rief, M Zacharias… - Science, 2016 - science.org
INTRODUCTION In DNA double helices, hydrogen bonds connect the base pairs across the
two strands, and stacking bonds act along the helical axis between neighboring base pairs …
two strands, and stacking bonds act along the helical axis between neighboring base pairs …