In-line holographic microscopy with model-based analysis

C Martin, LE Altman, S Rawat, A Wang… - Nature Reviews …, 2022 - nature.com
An in-line holographic microscope is an optical microscope outfitted with a coherent light
source, such as a laser. Light scattered by the specimen interferes with the transmitted …

Characterising soft matter using machine learning

PS Clegg - Soft Matter, 2021 - pubs.rsc.org
Machine learning is making a major impact in materials research. I review current progress
across a selection of areas of ubiquitous soft matter. When applied to particle tracking …

Machine-learning techniques for fast and accurate feature localization in holograms of colloidal particles

MD Hannel, A Abdulali, M O'Brien, DG Grier - Optics express, 2018 - opg.optica.org
Holograms of colloidal particles can be analyzed with the Lorenz-Mie theory of light
scattering to measure individual particles' three-dimensional positions with nanometer …

Holographic characterization of protein aggregates

C Wang, X Zhong, DB Ruffner, A Stutt, LA Philips… - Journal of …, 2016 - Elsevier
We demonstrate how holographic video microscopy can be used to detect, count, and
characterize individual micrometer-scale protein aggregates as they flow down a …

CATCH: Characterizing and tracking colloids holographically using deep neural networks

LE Altman, DG Grier - The Journal of Physical Chemistry B, 2020 - ACS Publications
In-line holographic microscopy provides an unparalleled wealth of information about the
properties of colloidal dispersions. Analyzing one colloidal particle's hologram with the …

Machine-learning approach to holographic particle characterization

A Yevick, M Hannel, DG Grier - Optics express, 2014 - opg.optica.org
Holograms of colloidal dispersions encode comprehensive information about individual
particles' three-dimensional positions, sizes and optical properties. Extracting that …

Machine learning enables precise holographic characterization of colloidal materials in real time

LE Altman, DG Grier - Soft Matter, 2023 - pubs.rsc.org
Holographic particle characterization uses in-line holographic video microscopy to track and
characterize individual colloidal particles dispersed in their native fluid media. Applications …

Trochoidal trajectories of self-propelled Janus particles in a diverging laser beam

H Moyses, J Palacci, S Sacanna, DG Grier - Soft Matter, 2016 - pubs.rsc.org
We describe colloidal Janus particles with metallic and dielectric faces that swim vigorously
when illuminated by defocused optical tweezers without consuming any chemical fuel …

The role of the medium in the effective-sphere interpretation of holographic particle characterization data

MA Odete, FC Cheong, A Winters, JJ Elliott, LA Philips… - Soft Matter, 2020 - pubs.rsc.org
The in-line hologram of a micrometer-scale colloidal sphere can be analyzed with the
Lorenz–Mie theory of light scattering to obtain precise measurements of the sphere's …

Precision single-particle localization using radial variance transform

AD Kashkanova, AB Shkarin, RG Mahmoodabadi… - Optics …, 2021 - opg.optica.org
We introduce an image transform designed to highlight features with high degree of radial
symmetry for identification and subpixel localization of particles in microscopy images. The …