A single-cell transcriptome atlas profiles early organogenesis in human embryos

Y Xu, T Zhang, Q Zhou, M Hu, Y Qi, Y Xue, Y Nie… - Nature cell …, 2023 - nature.com
The early window of human embryogenesis is largely a black box for developmental
biologists. Here we probed the cellular diversity of 4–6 week human embryos when …

Same, same but different: Exploring Plasmodium cell division during liver stage development

M Roques, A Bindschedler, R Beyeler… - PLoS …, 2023 - journals.plos.org
Plasmodium parasites have a complex life cycle alternating between a mosquito and a
vertebrate host. Following the bite of an Anopheles female mosquito, Plasmodium …

Molecular signature of subtypes of non-small-cell lung cancer by large-scale transcriptional profiling: identification of key modules and genes by weighted gene co …

M Niemira, F Collin, A Szalkowska, A Bielska… - Cancers, 2019 - mdpi.com
Non-small-cell lung cancer (NSCLC) represents a heterogeneous group of malignancies
consisting essentially of adenocarcinoma (ADC) and squamous cell carcinoma (SCC) …

Single-cell analysis of endometriosis reveals a coordinated transcriptional programme driving immunotolerance and angiogenesis across eutopic and ectopic tissues

Y Tan, WF Flynn, S Sivajothi, D Luo, SB Bozal… - Nature cell …, 2022 - nature.com
Endometriosis is characterized by the growth of endometrial-like tissue outside the uterus. It
affects many women during their reproductive age, causing years of pelvic pain and …

Immune cell gene signatures for profiling the microenvironment of solid tumors

AJ Nirmal, T Regan, BB Shih, DA Hume, AH Sims… - Cancer immunology …, 2018 - AACR
The immune composition of the tumor microenvironment regulates processes including
angiogenesis, metastasis, and the response to drugs or immunotherapy. To facilitate the …

Network analysis of transcriptomic diversity amongst resident tissue macrophages and dendritic cells in the mouse mononuclear phagocyte system

KM Summers, SJ Bush, DA Hume - PLoS biology, 2020 - journals.plos.org
The mononuclear phagocyte system (MPS) is a family of cells including progenitors,
circulating blood monocytes, resident tissue macrophages, and dendritic cells (DCs) present …

Single-cell chromatin accessibility profiling reveals a self-renewing muscle satellite cell state

AE Okafor, X Lin, C Situ, X Wei, Y **ang, X Wei… - Journal of Cell …, 2023 - rupress.org
A balance between self-renewal and differentiation is critical for the regenerative capacity of
tissue-resident stem cells. In skeletal muscle, successful regeneration requires the …

Reference transcriptomes of porcine peripheral immune cells created through bulk and single-cell RNA sequencing

J Herrera-Uribe, JE Wiarda, SK Sivasankaran… - Frontiers in …, 2021 - frontiersin.org
Pigs are a valuable human biomedical model and an important protein source supporting
global food security. The transcriptomes of peripheral blood immune cells in pigs were …

Genetic analyses of 104 phenotypes in 20,900 Chinese pregnant women reveal pregnancy-specific discoveries

H **ao, L Li, M Yang, X Zhang, J Zhou, J Zeng, Y Zhou… - Cell Genomics, 2024 - cell.com
Monitoring biochemical phenotypes during pregnancy is vital for maternal and fetal health,
allowing early detection and management of pregnancy-related conditions to ensure safety …

Transcription factor-driven coordination of cell cycle exit and lineage-specification in vivo during granulocytic differentiation: In memoriam Professor Niels Borregaard

K Theilgaard-Mönch, S Pundhir, K Reckzeh… - Nature …, 2022 - nature.com
Differentiation of multipotent stem cells into mature cells is fundamental for development and
homeostasis of mammalian tissues, and requires the coordinated induction of lineage …