Comparative immunogenomics of molluscs
Comparative immunology, studying both vertebrates and invertebrates, provided the earliest
descriptions of phagocytosis as a general immune mechanism. However, the large scale of …
descriptions of phagocytosis as a general immune mechanism. However, the large scale of …
Comparative analysis of commonly used bioinformatics software based on omics
M Xu, C Xu, M Chen, Z **ao, Y Wang, Y Xu, D Xu - Gene Reports, 2023 - Elsevier
As a widely used technology at the intersection of multiple disciplines in the field of natural
sciences, bioinformatics has received much attention from scholars for its development and …
sciences, bioinformatics has received much attention from scholars for its development and …
Evaluation of de novo transcriptome assemblies from RNA-Seq data
B Li, N Fillmore, Y Bai, M Collins, JA Thomson… - Genome biology, 2014 - Springer
De novo RNA-Seq assembly facilitates the study of transcriptomes for species without
sequenced genomes, but it is challenging to select the most accurate assembly in this …
sequenced genomes, but it is challenging to select the most accurate assembly in this …
rnaQUAST: a quality assessment tool for de novo transcriptome assemblies
Ability to generate large RNA-Seq datasets created a demand for both de novo and
reference-based transcriptome assemblers. However, while many transcriptome assemblers …
reference-based transcriptome assemblers. However, while many transcriptome assemblers …
Diversity of Conotoxin Gene Superfamilies in the Venomous Snail, Conus victoriae
Animal venoms represent a vast library of bioactive peptides and proteins with proven
potential, not only as research tools but also as drug leads and therapeutics. This is …
potential, not only as research tools but also as drug leads and therapeutics. This is …
Assessing De Novo transcriptome assembly metrics for consistency and utility
Background Transcriptome sequencing and assembly represent a great resource for the
study of non-model species, and many metrics have been used to evaluate and compare …
study of non-model species, and many metrics have been used to evaluate and compare …
Signatures of Rapid Evolution in Urban and Rural Transcriptomes of White-Footed Mice (Peromyscus leucopus) in the New York Metropolitan Area
Urbanization is a major cause of ecological degradation around the world, and human
settlement in large cities is accelerating. New York City (NYC) is one of the oldest and most …
settlement in large cities is accelerating. New York City (NYC) is one of the oldest and most …
[HTML][HTML] Transcriptome sequencing and marker development in winged bean (Psophocarpus tetragonolobus; Leguminosae)
Winged bean, Psophocarpus tetragonolobus (L.) DC., is similar to soybean in yield and
nutritional value but more viable in tropical conditions. Here, we strengthen genetic …
nutritional value but more viable in tropical conditions. Here, we strengthen genetic …
Exploring local immunological adaptation of two stickleback ecotypes by experimental infection and transcriptome‐wide digital gene expression analysis
Understanding the extent of local adaptation in natural populations and the mechanisms that
allow individuals to adapt to their native environment is a major avenue in molecular …
allow individuals to adapt to their native environment is a major avenue in molecular …
Distinct gut virome profile of pregnant women with type 1 diabetes in the ENDIA study
Background The importance of gut bacteria in human physiology, immune regulation, and
disease pathogenesis is well established. In contrast, the composition and dynamics of the …
disease pathogenesis is well established. In contrast, the composition and dynamics of the …