The effect of growth and curvature on pattern formation

RG Plaza, F Sanchez-Garduno, P Padilla… - Journal of dynamics and …, 2004 - Springer
Based on first principles, we derive a general model to describe the spatio-temporal
dynamics of two morphogens. The diffusive part of the model incorporates the dynamics …

A moving grid finite element method applied to a model biological pattern generator

A Madzvamuse, AJ Wathen, PK Maini - Journal of computational physics, 2003 - Elsevier
Many problems in biology involve growth. In numerical simulations it can therefore be very
convenient to employ a moving computational grid on a continuously deforming domain. In …

Velocity-induced numerical solutions of reaction-diffusion systems on continuously growing domains

A Madzvamuse, PK Maini - Journal of computational physics, 2007 - Elsevier
Reaction-diffusion systems have been widely studied in developmental biology, chemistry
and more recently in financial mathematics. Most of these systems comprise nonlinear …

Application of discontinuous Galerkin methods for reaction-diffusion systems in developmental biology

J Zhu, YT Zhang, SA Newman, M Alber - Journal of Scientific Computing, 2009 - Springer
Nonlinear reaction-diffusion systems which are often employed in mathematical modeling in
developmental biology are usually highly stiff in both diffusion and reaction terms. Moreover …

Existence of spatiotemporal patterns in the reaction–diffusion predator–prey model incorporating prey refuge

LN Guin, B Mondal, S Chakravarty - International Journal of …, 2016 - World Scientific
The pattern formation in reaction–diffusion system has long been the subject of interest to
the researchers in the domain of mathematical ecology because of its universal existence …

Identification of approximate symmetries in biological development

P Gandhi, MV Ciocanel, K Niklas… - … Transactions of the …, 2021 - royalsocietypublishing.org
Virtually all forms of life, from single-cell eukaryotes to complex, highly differentiated
multicellular organisms, exhibit a property referred to as symmetry. However, precise …

Biological information as set-based complexity

DJ Galas, M Nykter, GW Carter… - IEEE Transactions …, 2010 - ieeexplore.ieee.org
The significant and meaningful fraction of all the potential information residing in the
molecules and structures of living systems is unknown. Sets of random molecular …

Turing pattern prediction in three-dimensional domains: the role of initial conditions and growth

S Ben Tahar, JJ Muñoz, SJ Shefelbine, E Comellas - bioRxiv, 2023 - biorxiv.org
Reaction-diffusion systems have been widely used to model pattern formation in biological
systems. However, the emergence of Turing patterns in three-dimensional (3D) domains …

[HTML][HTML] Highly efficient NURBS-based isogeometric analysis for coupled nonlinear diffusion–reaction equations with and without advection

I Asmouh, A Ostermann - Journal of Computational Science, 2024 - Elsevier
Nonlinear diffusion-reaction systems model a multitude of physical phenomena. A common
situation is biological development modeling where such systems have been widely used to …

Morphological transitions and bistability in Turing systems

T Leppänen, M Karttunen, RA Barrio, K Kaski - Physical Review E—Statistical …, 2004 - APS
It is well known that in two dimensions Turing systems produce spots, stripes and
labyrinthine patterns, and in three dimensions lamellar and spherical structures, or their …