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Chasing molecular glue degraders: screening approaches
A Domostegui, L Nieto-Barrado… - Chemical Society …, 2022 - pubs.rsc.org
Protein–protein interactions (PPIs) govern all biological processes. Some small molecules
modulate PPIs through induced protein proximity. In particular, molecular glue degraders …
modulate PPIs through induced protein proximity. In particular, molecular glue degraders …
PROTAC'ing oncoproteins: targeted protein degradation for cancer therapy
Molecularly targeted cancer therapies substantially improve patient outcomes, although the
durability of their effectiveness can be limited. Resistance to these therapies is often related …
durability of their effectiveness can be limited. Resistance to these therapies is often related …
Improved prediction of protein-protein interactions using AlphaFold2
Predicting the structure of interacting protein chains is a fundamental step towards
understanding protein function. Unfortunately, no computational method can produce …
understanding protein function. Unfortunately, no computational method can produce …
Towards a structurally resolved human protein interaction network
Cellular functions are governed by molecular machines that assemble through protein-
protein interactions. Their atomic details are critical to studying their molecular mechanisms …
protein interactions. Their atomic details are critical to studying their molecular mechanisms …
Deciphering interaction fingerprints from protein molecular surfaces using geometric deep learning
Predicting interactions between proteins and other biomolecules solely based on structure
remains a challenge in biology. A high-level representation of protein structure, the …
remains a challenge in biology. A high-level representation of protein structure, the …
[HTML][HTML] The immune landscape of cancer
We performed an extensive immunogenomic analysis of more than 10,000 tumors
comprising 33 diverse cancer types by utilizing data compiled by TCGA. Across cancer …
comprising 33 diverse cancer types by utilizing data compiled by TCGA. Across cancer …
DeepProSite: structure-aware protein binding site prediction using ESMFold and pretrained language model
Motivation Identifying the functional sites of a protein, such as the binding sites of proteins,
peptides, or other biological components, is crucial for understanding related biological …
peptides, or other biological components, is crucial for understanding related biological …
PeSTo: parameter-free geometric deep learning for accurate prediction of protein binding interfaces
Proteins are essential molecular building blocks of life, responsible for most biological
functions as a result of their specific molecular interactions. However, predicting their …
functions as a result of their specific molecular interactions. However, predicting their …
Network-based prediction of protein interactions
Despite exceptional experimental efforts to map out the human interactome, the continued
data incompleteness limits our ability to understand the molecular roots of human disease …
data incompleteness limits our ability to understand the molecular roots of human disease …
Small molecules, big targets: drug discovery faces the protein–protein interaction challenge
DE Scott, AR Bayly, C Abell, J Skidmore - Nature Reviews Drug …, 2016 - nature.com
Protein–protein interactions (PPIs) are of pivotal importance in the regulation of biological
systems and are consequently implicated in the development of disease states. Recent work …
systems and are consequently implicated in the development of disease states. Recent work …