Lattice-Boltzmann modelling for inertial particle microfluidics applications-a tutorial review

B Owen, K Kechagidis, SR Bazaz… - … in Physics: X, 2023 - Taylor & Francis
Inertial particle microfluidics (IPMF) is an emerging technology for the manipulation and
separation of microparticles and biological cells. Since the flow physics of IPMF is complex …

[HTML][HTML] Generative models of morphogenesis in developmental biology

NR Stillman, R Mayor - Seminars in Cell & Developmental Biology, 2023 - Elsevier
Understanding the mechanism by which cells coordinate their differentiation and migration
is critical to our understanding of many fundamental processes such as wound healing …

Finite element models of osteocytes and their load-induced activation

TH Smit - Current Osteoporosis Reports, 2022 - Springer
Abstract Purpose of Review Osteocytes are the conductors of bone adaptation and
remodelling. Buried inside the calcified matrix, they sense mechanical cues and signal …

Adapting modeling and simulation credibility standards to computational systems biology

LT Tatka, LP Smith, JL Hellerstein… - Journal of Translational …, 2023 - Springer
Computational models are increasingly used in high-impact decision making in science,
engineering, and medicine. The National Aeronautics and Space Administration (NASA) …

Standards, dissemination, and best practices in systems biology

J Shin, V Porubsky, J Carothers, HM Sauro - Current opinion in …, 2023 - Elsevier
The reproducibility of scientific research is crucial to the success of the scientific method.
Here, we review the current best practices when publishing mechanistic models in systems …

Machine Learning in Biomaterials, Biomechanics/Mechanobiology, and Biofabrication: State of the Art and Perspective

C Wu, Y Xu, J Fang, Q Li - Archives of Computational Methods in …, 2024 - Springer
In the past three decades, biomedical engineering has emerged as a significant and rapidly
growing field across various disciplines. From an engineering perspective, biomaterials …

Topology generation and quantitative stiffness analysis for fiber networks based on disordered spatial truss

S Huang, Y Wang, X Xu, Y Luo - Journal of the Mechanics and Physics of …, 2025 - Elsevier
Fiber networks are essential functional materials, yet existing mechanical models only
capture specific aspects of their mechanical properties. This paper proposes a general …

A review of the development and challenges of cell mechanical models

Y Gu, C Zhang, Y Zhang, W Tan, X Yu… - IEEE Transactions …, 2023 - ieeexplore.ieee.org
Cell models can express a variety of cell information, including mechanical properties,
electrical properties, and chemical properties. Through the analysis of these properties, we …

Vibration of protein microtubules within the elastic medium along with electromagnetic and gravitational forces by using orthotropic elastic shell model

M Safeer, M Taj, MA Iqbal - Journal of Vibration and Control, 2024 - journals.sagepub.com
In the present study, author analyses the vibration of protein microtubules and its interaction
with the surrounding elastic medium and electromagnetic and gravitational forces. Protein …

Impact of physiological loads of arterial wall on nucleus deformation in endothelial cells: A computational study

VVSV Jakka, J Bursa - Computers in Biology and Medicine, 2022 - Elsevier
Introduction Computational modeling can enhance the understanding of cell mechanics. To
achieve this, finite element models of endothelial cells were proposed with shapes …