Computational optimal transport: With applications to data science

G Peyré, M Cuturi - Foundations and Trends® in Machine …, 2019 - nowpublishers.com
Optimal transport (OT) theory can be informally described using the words of the French
mathematician Gaspard Monge (1746–1818): A worker with a shovel in hand has to move a …

Maximum flow and minimum-cost flow in almost-linear time

L Chen, R Kyng, YP Liu, R Peng… - 2022 IEEE 63rd …, 2022 - ieeexplore.ieee.org
We give an algorithm that computes exact maximum flows and minimum-cost flows on
directed graphs with m edges and polynomially bounded integral demands, costs, and …

Wasserstein distributionally robust optimization: Theory and applications in machine learning

D Kuhn, PM Esfahani, VA Nguyen… - … science in the age …, 2019 - pubsonline.informs.org
Many decision problems in science, engineering, and economics are affected by uncertain
parameters whose distribution is only indirectly observable through samples. The goal of …

Density functionals based on the mathematical structure of the strong‐interaction limit of DFT

S Vuckovic, A Gerolin, KJ Daas… - Wiley …, 2023 - Wiley Online Library
While in principle exact, Kohn–Sham density functional theory—the workhorse of
computational chemistry—must rely on approximations for the exchange–correlation …

Pot: Python optimal transport

R Flamary, N Courty, A Gramfort, MZ Alaya… - Journal of Machine …, 2021 - jmlr.org
Optimal transport has recently been reintroduced to the machine learning community thanks
in part to novel efficient optimization procedures allowing for medium to large scale …

Near-linear time approximation algorithms for optimal transport via Sinkhorn iteration

J Altschuler, J Niles-Weed… - Advances in neural …, 2017 - proceedings.neurips.cc
Computing optimal transport distances such as the earth mover's distance is a fundamental
problem in machine learning, statistics, and computer vision. Despite the recent introduction …

Graph optimal transport for cross-domain alignment

L Chen, Z Gan, Y Cheng, L Li… - … on Machine Learning, 2020 - proceedings.mlr.press
Cross-domain alignment between two sets of entities (eg, objects in an image, words in a
sentence) is fundamental to both computer vision and natural language processing. Existing …

Optimal mass transport: Signal processing and machine-learning applications

S Kolouri, SR Park, M Thorpe… - IEEE signal …, 2017 - ieeexplore.ieee.org
Transport-based techniques for signal and data analysis have recently received increased
interest. Given their ability to provide accurate generative models for signal intensities and …

Gene expression cartography

M Nitzan, N Karaiskos, N Friedman, N Rajewsky - Nature, 2019 - nature.com
Multiplexed RNA sequencing in individual cells is transforming basic and clinical life
sciences,,–. Often, however, tissues must first be dissociated, and crucial information about …

Deep generalized schrödinger bridge

GH Liu, T Chen, O So… - Advances in Neural …, 2022 - proceedings.neurips.cc
Abstract Mean-Field Game (MFG) serves as a crucial mathematical framework in modeling
the collective behavior of individual agents interacting stochastically with a large population …