Detection of aberrant gene expression events in RNA sequencing data
RNA sequencing (RNA-seq) has emerged as a powerful approach to discover disease-
causing gene regulatory defects in individuals affected by genetically undiagnosed rare …
causing gene regulatory defects in individuals affected by genetically undiagnosed rare …
Reviving the transcriptome studies: an insight into the emergence of single-molecule transcriptome sequencing
Advances in transcriptomics have provided an exceptional opportunity to study functional
implications of the genetic variability. Technologies such as RNA-Seq have emerged as …
implications of the genetic variability. Technologies such as RNA-Seq have emerged as …
A multi-tissue atlas of regulatory variants in cattle
Abstract Characterization of genetic regulatory variants acting on livestock gene expression
is essential for interpreting the molecular mechanisms underlying traits of economic value …
is essential for interpreting the molecular mechanisms underlying traits of economic value …
The GTEx Consortium atlas of genetic regulatory effects across human tissues
GTEx Consortium - Science, 2020 - science.org
The Genotype-Tissue Expression (GTEx) project was established to characterize genetic
effects on the transcriptome across human tissues and to link these regulatory mechanisms …
effects on the transcriptome across human tissues and to link these regulatory mechanisms …
The impact of sex on gene expression across human tissues
INTRODUCTION Many complex human phenotypes, including diseases, exhibit sex-
differentiated characteristics. These sex differences have been variously attributed to …
differentiated characteristics. These sex differences have been variously attributed to …
A compendium of genetic regulatory effects across pig tissues
Abstract The Farm Animal Genotype-Tissue Expression (FarmGTEx) project has been
established to develop a public resource of genetic regulatory variants in livestock, which is …
established to develop a public resource of genetic regulatory variants in livestock, which is …
Pervasive chromosomal instability and karyotype order in tumour evolution
Chromosomal instability in cancer consists of dynamic changes to the number and structure
of chromosomes,. The resulting diversity in somatic copy number alterations (SCNAs) may …
of chromosomes,. The resulting diversity in somatic copy number alterations (SCNAs) may …
Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease
Long non-coding RNA (lncRNA) genes have well-established and important impacts on
molecular and cellular functions. However, among the thousands of lncRNA genes, it is still …
molecular and cellular functions. However, among the thousands of lncRNA genes, it is still …
WhatsHap: fast and accurate read-based phasing
Read-based phasing allows to reconstruct the haplotype structure of a sample purely from
sequencing reads. While phasing is a required step for answering questions about …
sequencing reads. While phasing is a required step for answering questions about …
Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk
Coding variants represent many of the strongest associations between genotype and
phenotype; however, they exhibit inter-individual differences in effect, termed 'variable …
phenotype; however, they exhibit inter-individual differences in effect, termed 'variable …