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Predicting preferential DNA vector insertion sites: implications for functional genomics and gene therapy
Viral and transposon vectors have been employed in gene therapy as well as functional
genomics studies. However, the goals of gene therapy and functional genomics are entirely …
genomics studies. However, the goals of gene therapy and functional genomics are entirely …
[PDF][PDF] Transposable elements and the detection of somaclonal variation in plant tissue culture: a review.
Plant tissue culture uses the genetic potential, or totipotency, of plants to regenerate and
give rise to a whole plant. Tissue culture-derived plants are expected to have identical …
give rise to a whole plant. Tissue culture-derived plants are expected to have identical …
Genome-wide analysis of mobile genetic element insertion sites
K Rawal, R Ramaswamy - Nucleic acids research, 2011 - academic.oup.com
Mobile genetic elements (MGEs) account for a significant fraction of eukaryotic genomes
and are implicated in altered gene expression and disease. We present an efficient …
and are implicated in altered gene expression and disease. We present an efficient …
Characterization of the restriction enzyme‐like endonuclease encoded by the Entamoeba histolytica non‐long terminal repeat retrotransposon EhLINE1
The genome of the human pathogen Entamoeba histolytica, a primitive protist, contains non‐
long terminal repeat retrotransposable elements called EhLINEs. These encode reverse …
long terminal repeat retrotransposable elements called EhLINEs. These encode reverse …
Differential distribution of a SINE element in the Entamoeba histolytica and Entamoeba dispar genomes: Role of the LINE-encoded endonuclease
Abstract Background Entamoeba histolytica and Entamoeba dispar are closely related
protistan parasites but while E. histolytica can be invasive, E. dispar is completely non …
protistan parasites but while E. histolytica can be invasive, E. dispar is completely non …
Detecting motifs and patterns at mobile genetic element insertion site
BB Dev, A Malik, K Rawal - Bioinformation, 2012 - pmc.ncbi.nlm.nih.gov
Mobile genetic elements (MGEs) occupy major proportion of eukaryotic genomes and are
present in significant numbers in prokaryote genomes also. Here we report a new method …
present in significant numbers in prokaryote genomes also. Here we report a new method …
RetroPred: A tool for prediction, classification and extraction of non-LTR retrotransposons (LINEs & SINEs) from the genome by integrating PALS, PILER, MEME and …
The problem of predicting non-long terminal repeats (LTR) like long interspersed nuclear
elements (LINEs) and short interspersed nuclear elements (SINEs) from the DNA sequence …
elements (LINEs) and short interspersed nuclear elements (SINEs) from the DNA sequence …
DRUG SIDE EFFECT NEIGHBOURS: Python Program Checking The Side Effects Of Drug And Covid Drugs.
P Priya, K Rawal, T Sharma, N Arambam - 2022 - osf.io
The most recent SARS-CoV-2 outbreak has brought to light grave worries about the dangers
of new infectious viruses. with limited time for the progress of new drugs. In the clinical area …
of new infectious viruses. with limited time for the progress of new drugs. In the clinical area …
A Novel Artificial Intelligence and Machine learning-based scoring system for evaluating re-purposing potential of Valproic Acid drug in COVID-19.
A Aggarwal, R Sinha, P Preeti, T Sharma, K Rawal - 2022 - osf.io
Background Despite widespread vaccinations and the introduction of many repurposed
medications, the rise of COVID-19 reinfection due to the SARS-CoV Omicron (B. 1.1. 529) …
medications, the rise of COVID-19 reinfection due to the SARS-CoV Omicron (B. 1.1. 529) …
Distribution of MGEs and their insertion sites in the Macaca mulatta genome
K Rawal, A Priya, A Malik, R Bahl… - Mobile Genetic …, 2012 - Taylor & Francis
Mobile genetic elements (MGEs) are fragments of DNA that can move around within the
genome through retrotransposition. These are responsible for various important events such …
genome through retrotransposition. These are responsible for various important events such …