Integrating diverse statistical methods to analyse stage-discriminatory cell interactions in colorectal neoplasia

JA Bull, EJ Mulholland, JW Moore, JJ Bosque, BJ Stolz… - BioRxiv, 2024 - biorxiv.org
Spatial biology has the potential to unlock information about the disrupted cellular
ecosystems that define human disease. Quantitative analysis of spatially-resolved cell …

pasta: Pattern Analysis for Spatial Omics Data

M Emons, S Gunz, HL Crowell, I Mallona… - arxiv preprint arxiv …, 2024 - arxiv.org
Spatial omics assays allow for the molecular characterisation of cells in their spatial context.
Notably, the two main technological streams, imaging-based and high-throughput …

Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19

CA Garcia-Prieto, E Musulen, V Davalos, G Ferrer… - bioRxiv, 2024 - biorxiv.org
ABSTRACT Severe Coronavirus disease 2019 (COVID-19) induces heterogeneous and
progressive diffuse alveolar damage (DAD) highly disrupting lung tissue architecture and …

[PDF][PDF] Graph Neural Network-Driven Analysis of Cellular Organization for Non-Small Cell Lung Cancer Precision Oncology

L Rabuzin - 2024 - research-collection.ethz.ch
Non-small cell lung cancer (NSCLC) remains a leading cause of cancerrelated mortality,
underscoring the urgent need for advanced diagnostic and therapeutic strategies. This study …