Regulation of disease-associated gene expression in the 3D genome

PHL Krijger, W De Laat - Nature reviews Molecular cell biology, 2016 - nature.com
Genetic variation associated with disease often appears in non-coding parts of the genome.
Understanding the mechanisms by which this phenomenon leads to disease is necessary to …

Neural remodeling in retinal degeneration

RE Marc, BW Jones, CB Watt, E Strettoi - Progress in retinal and eye …, 2003 - Elsevier
Mammalian retinal degenerations initiated by gene defects in rods, cones or the retinal
pigmented epithelium (RPE) often trigger loss of the sensory retina, effectively leaving the …

CRISPR inversion of CTCF sites alters genome topology and enhancer/promoter function

Y Guo, Q Xu, D Canzio, J Shou, J Li, DU Gorkin, I Jung… - Cell, 2015 - cell.com
CTCF and the associated cohesin complex play a central role in insulator function and
higher-order chromatin organization of mammalian genomes. Recent studies identified a …

[BOK][B] Genetics and philosophy: An introduction

P Griffiths, K Stotz - 2013 - books.google.com
In the past century, nearly all of the biological sciences have been directly affected by
discoveries and developments in genetics, a fast-evolving subject with important theoretical …

Broad epigenetic signature of maternal care in the brain of adult rats

PO McGowan, M Suderman, A Sasaki, TCT Huang… - PloS one, 2011 - journals.plos.org
Background Maternal care is associated with long-term effects on behavior and epigenetic
programming of the NR3C1 (GLUCOCORTICOID RECEPTOR) gene in the hippocampus of …

Protocadherins at the crossroad of signaling pathways

A Pancho, T Aerts, MD Mitsogiannis… - Frontiers in Molecular …, 2020 - frontiersin.org
Protocadherins (Pcdhs) are cell adhesion molecules that belong to the cadherin
superfamily, and are subdivided into clustered (cPcdhs) and non-clustered Pcdhs (ncPcdhs) …

Conserved epigenetic sensitivity to early life experience in the rat and human hippocampus

M Suderman, PO McGowan, A Sasaki… - Proceedings of the …, 2012 - National Acad Sciences
Early life experience is associated with long-term effects on behavior and epigenetic
programming of the NR3C1 (GLUCOCORTICOID RECEPTOR) gene in the hippocampus of …

Cadherins in brain morphogenesis and wiring

S Hirano, M Takeichi - Physiological reviews, 2012 - journals.physiology.org
Cadherins are Ca2+-dependent cell-cell adhesion molecules that play critical roles in
animal morphogenesis. Various cadherin-related molecules have also been identified …

Antisense lncRNA transcription mediates DNA demethylation to drive stochastic protocadherin α promoter choice

D Canzio, CL Nwakeze, A Horta, SM Rajkumar… - Cell, 2019 - cell.com
Stochastic activation of clustered Protocadherin (Pcdh) α, β, and γ genes generates a cell-
surface identity code in individual neurons that functions in neural circuit assembly. Here, we …

CTCF/cohesin-mediated DNA loo** is required for protocadherin α promoter choice

Y Guo, K Monahan, H Wu, J Gertz… - Proceedings of the …, 2012 - National Acad Sciences
The closely linked human protocadherin (Pcdh) α, β, and γ gene clusters encode 53 distinct
protein isoforms, which are expressed in a combinatorial manner to generate enormous …