Signals of local adaptation have been found in many plants and animals, highlighting the
heterogeneity in the distribution of adaptive genetic variation throughout species ranges. In …

High-throughput techniques based on restriction site-associated DNA sequencing (RADseq)
are enabling the low-cost discovery and genoty** of thousands of genetic markers for any …

The origin of domesticated Asian rice (Oryza sativa L.) has been controversial for more than
half a century. The debates have focused on two leading hypotheses: a single domestication …

As population genomic datasets grow in size, researchers are faced with the daunting task
of making sense of a flood of information. To keep pace with this explosion of data …

Previous work found that the co-occurring mutations R203K/G204R on the SARS-CoV-2
nucleocapsid (N) protein are increasing in frequency among emerging variants of concern …

Background Sheep were among the first animals to be domesticated. They are raised all
over the world and produce a major scale of animal-based protein for human consumption …

Ancestral recombination graphs (ARGs) summarize the complex genealogical relationships
between individuals represented in a sample of DNA sequences. Their use is currently …

We introduce a flexible and robust simulation-based framework to infer demographic
parameters from the site frequency spectrum (SFS) computed on large genomic datasets …

Although many computer programs can perform population genetics calculations, they are
typically limited in the analyses and data input formats they offer; few applications can …

Patterns of variation and evolution at a given site in a genome can be strongly influenced by
the effects of selection at genetically linked sites. In particular, the recombination rates of …