The current developments in medicinal plant genomics enabled the diversification of secondary metabolites' biosynthesis

MM Alami, Z Ouyang, Y Zhang, S Shu, G Yang… - International journal of …, 2022 - mdpi.com
Medicinal plants produce important substrates for their adaptation and defenses against
environmental factors and, at the same time, are used for traditional medicine and industrial …

Genomic insights into domestication and genetic improvement of fruit crops

R Wang, X Li, M Sun, C Xue, SS Korban… - Plant …, 2023 - academic.oup.com
Fruit crops cultivated in almost all countries and regions around the world serve as important
agricultural commodities of significant economic value because they contribute to overall …

scDART: integrating unmatched scRNA-seq and scATAC-seq data and learning cross-modality relationship simultaneously

Z Zhang, C Yang, X Zhang - Genome biology, 2022 - Springer
It is a challenging task to integrate scRNA-seq and scATAC-seq data obtained from different
batches. Existing methods tend to use a pre-defined gene activity matrix to convert the …

Pan-genome of Raphanus highlights genetic variation and introgression among domesticated, wild, and weedy radishes

X Zhang, T Liu, J Wang, P Wang, Y Qiu, W Zhao… - Molecular Plant, 2021 - cell.com
Post-polyploid diploidization associated with descending dysploidy and interspecific
introgression drives plant genome evolution by unclear mechanisms. Raphanus is an …

Differential effects of low and high temperature stress on pollen germination and tube length of mango (Mangifera indica L.) genotypes

X Liu, Y **ao, J Zi, J Yan, C Li, C Du, J Wan, H Wu… - Scientific Reports, 2023 - nature.com
Mango flowering is highly sensitive to temperature changes. In this research, the maximum
values of pollen germination rate (PGR), pollen tube length (PTL) and their cardinal …

[HTML][HTML] Application of mathematical techniques to study the moisture loss kinetics and polyphenol degradation kinetics of mango (Mangifera indica L.) slices during …

BTT Thao, TTK Vo, TYN Tran, DT Le, TT Tran, LG Bach… - Lwt, 2023 - Elsevier
In this study, mathematical technique was applied to evaluate the moisture loss and
polyphenol compound degradation during the heat pump drying of mango slices. The …

Genomic approaches for improvement of tropical fruits: fruit quality, shelf life and nutrient content

M Mathiazhagan, B Chidambara, LR Hunashikatti… - Genes, 2021 - mdpi.com
The breeding of tropical fruit trees for improving fruit traits is complicated, due to the long
juvenile phase, generation cycle, parthenocarpy, polyploidy, polyembryony, heterozygosity …

A proposed metric set for evaluation of genome assembly quality

P Wang, F Wang - Trends in Genetics, 2023 - cell.com
Quality control is essential for genome assemblies; however, a consensus has yet to be
reached on what metrics should be adopted for the evaluation of assembly quality. N50 is …

Large‐scale genome sampling reveals unique immunity and metabolic adaptations in bats

DD Moreno Santillán, TM Lama… - Molecular …, 2021 - Wiley Online Library
Abstract Comprising more than 1,400 species, bats possess adaptations unique among
mammals including powered flight, unexpected longevity, and extraordinary immunity. Some …

Complete mitochondrial genomes of three Mangifera species, their genomic structure and gene transfer from chloroplast genomes

Y Niu, C Gao, J Liu - BMC genomics, 2022 - Springer
Abstract Background Among the Mangifera species, mango (Mangifera indica) is an
important commercial fruit crop. However, very few studies have been conducted on the …