Lamina-associated domains: links with chromosome architecture, heterochromatin, and gene repression

B Van Steensel, AS Belmont - Cell, 2017 - cell.com
In metazoan cell nuclei, hundreds of large chromatin domains are in close contact with the
nuclear lamina. Such lamina-associated domains (LADs) are thought to help organize …

CRISPR/Cas9 in genome editing and beyond

H Wang, M La Russa, LS Qi - Annual review of biochemistry, 2016 - annualreviews.org
The Cas9 protein (CRISPR-associated protein 9), derived from type II CRISPR (clustered
regularly interspaced short palindromic repeats) bacterial immune systems, is emerging as a …

Regulation of genome organization and gene expression by nuclear mechanotransduction

C Uhler, GV Shivashankar - Nature reviews Molecular cell biology, 2017 - nature.com
It is well established that cells sense chemical signals from their local microenvironment and
transduce them to the nucleus to regulate gene expression programmes. Although a number …

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

T Nagano, Y Lubling, TJ Stevens, S Schoenfelder… - Nature, 2013 - nature.com
Large-scale chromosome structure and spatial nuclear arrangement have been linked to
control of gene expression and DNA replication and repair. Genomic techniques based on …

Cas9 as a versatile tool for engineering biology

P Mali, KM Esvelt, GM Church - Nature methods, 2013 - nature.com
RNA-guided Cas9 nucleases derived from clustered regularly interspaced short palindromic
repeats (CRISPR)-Cas systems have dramatically transformed our ability to edit the …

Architectural protein subclasses shape 3D organization of genomes during lineage commitment

JE Phillips-Cremins, MEG Sauria, A Sanyal… - Cell, 2013 - cell.com
Understanding the topological configurations of chromatin may reveal valuable insights into
how the genome and epigenome act in concert to control cell fate during development …

Replication stress is a potent driver of functional decline in ageing haematopoietic stem cells

J Flach, ST Bakker, M Mohrin, PC Conroy, EM Pietras… - Nature, 2014 - nature.com
Haematopoietic stem cells (HSCs) self-renew for life, thereby making them one of the few
blood cells that truly age,. Paradoxically, although HSCs numerically expand with age, their …

[HTML][HTML] Three-dimensional folding and functional organization principles of the Drosophila genome

T Sexton, E Yaffe, E Kenigsberg, F Bantignies… - Cell, 2012 - cell.com
Chromosomes are the physical realization of genetic information and thus form the basis for
its readout and propagation. Here we present a high-resolution chromosomal contact map …

3D chromatin architecture of large plant genomes determined by local A/B compartments

P Dong, X Tu, PY Chu, P Lü, N Zhu, D Grierson, B Du… - Molecular plant, 2017 - cell.com
The spatial organization of the genome plays an important role in the regulation of gene
expression. However, the core structural features of animal genomes, such as topologically …

[HTML][HTML] Present and future challenges for the investigation of transgenerational epigenetic inheritance

M Fallet, M Blanc, M Di Criscio, P Antczak… - Environment …, 2023 - Elsevier
Epigenetic pathways are essential in different biological processes and in phenotype-
environment interactions in response to different stressors and they can induce phenotypic …