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Theoretical spectroscopy of floppy peptides at room temperature. A DFTMD perspective: gas and aqueous phase
MP Gaigeot - Physical Chemistry Chemical Physics, 2010 - pubs.rsc.org
Theoretical spectroscopy is mandatory for a precise understanding and assignment of
experimental spectra recorded at finite temperature. We review here room temperature DFT …
experimental spectra recorded at finite temperature. We review here room temperature DFT …
Computing vibrational spectra from ab initio molecular dynamics
We review several methods for the calculation of vibrational spectra from ab initio molecular
dynamics (AIMD) simulations and we present a new implementation in the trajectory …
dynamics (AIMD) simulations and we present a new implementation in the trajectory …
Structural and electronic properties of organo-halide lead perovskites: a combined IR-spectroscopy and ab initio molecular dynamics investigation
Organo-halide lead perovskites are revolutionizing the photovoltaic scenario, with
efficiencies exceeding 15%. The orientational dynamics disorder of the methylammonium …
efficiencies exceeding 15%. The orientational dynamics disorder of the methylammonium …
[HTML][HTML] The dipole moment of alcohols in the liquid phase and in solution
Understanding polarization effects in condensed phases, like liquids and solutions, requires
computational methods that can accurately predict dipole moments and energy of polarized …
computational methods that can accurately predict dipole moments and energy of polarized …
Development and application of in situ/operando soft X-ray transmission cells to aqueous solutions and catalytic and electrochemical reactions
In this review, we have demonstrated several applications of newly-developed in
situ/operando liquid flow cells for the transmission XAS (X-ray absorption spectroscopy) …
situ/operando liquid flow cells for the transmission XAS (X-ray absorption spectroscopy) …
Infrared spectroscopy in the gas and liquid phase from first principle molecular dynamics simulations: application to small peptides
We discuss the applicability of finite temperature Car–Parrinello molecular dynamics
simulations for the calculation of infrared spectra of complex molecular systems, either in the …
simulations for the calculation of infrared spectra of complex molecular systems, either in the …
A density functional study of methanol clusters
SL Boyd, RJ Boyd - Journal of Chemical Theory and Computation, 2007 - ACS Publications
The potential energy surfaces of methanol clusters,(CH3OH) n, n= 2− 12, have been studied
using density functional theory at the B3LYP/6-31G (d) and higher levels of theory. Cyclic …
using density functional theory at the B3LYP/6-31G (d) and higher levels of theory. Cyclic …
Realistic modeling of ruthenium-catalyzed transfer hydrogenation
JW Handgraaf, EJ Meijer - Journal of the American Chemical …, 2007 - ACS Publications
We report the first computational study of a fully atomistic model of the ruthenium-catalyzed
transfer hydrogenation of formaldehyde and the reverse reaction in an explicit methanol …
transfer hydrogenation of formaldehyde and the reverse reaction in an explicit methanol …
Raman spectra from ab initio molecular dynamics and its application to liquid S-methyloxirane
We describe the calculation of Raman spectra for periodic systems via ab initio molecular
dynamics (AIMD) utilizing the Gaussian and plane wave method in the program package …
dynamics (AIMD) utilizing the Gaussian and plane wave method in the program package …
Extracting effective normal modes from equilibrium dynamics at finite temperature
A general method for obtaining effective normal modes of a molecular system from
molecular dynamics simulations is presented. The method is based on a localization …
molecular dynamics simulations is presented. The method is based on a localization …