The biochemistry and structural biology of plant cell wall deconstruction

HJ Gilbert - Plant physiology, 2010 - academic.oup.com
The cell walls of plants are the most abundant source of organic carbon on the planet. This
photosynthetically fixed carbon is recycled by microbial enzymes that convert cell wall …

Using structure to inform carbohydrate binding module function

DW Abbott, AL van Bueren - Current opinion in structural biology, 2014 - Elsevier
Highlights•The 'Region Model'is presented to outline key functional regions within β-
sandwich CBMs.•The variable loop site (VLS) and concave face site (CFS) binding site …

Dividing the large glycoside hydrolase family 43 into subfamilies: a motivation for detailed enzyme characterization

K Mewis, N Lenfant, V Lombard… - Applied and …, 2016 - journals.asm.org
The rapid rise in DNA sequencing has led to an expansion in the number of glycoside
hydrolase (GH) families. The GH43 family currently contains α-l-arabinofuranosidase, β-d …

Structure and function of an arabinoxylan-specific xylanase

MAS Correia, K Mazumder, JLA Brás, SJ Firbank… - Journal of Biological …, 2011 - jbc.org
The enzymatic degradation of plant cell walls plays a central role in the carbon cycle and is
of increasing environmental and industrial significance. The enzymes that catalyze this …

SACCHARIS: an automated pipeline to streamline discovery of carbohydrate active enzyme activities within polyspecific families and de novo sequence datasets

DR Jones, D Thomas, N Alger, A Ghavidel… - Biotechnology for …, 2018 - Springer
Background Deposition of new genetic sequences in online databases is expanding at an
unprecedented rate. As a result, sequence identification continues to outpace functional …

A novel multifunctional arabinofuranosidase/endoxylanase/β-xylosidase gh43 enzyme from paenibacillus curdlanolyticus b-6 and its synergistic action to produce …

P Limsakul, P Phitsuwan, R Waeonukul… - Applied and …, 2021 - journals.asm.org
PcAxy43B is a modular protein comprising a catalytic domain of glycoside hydrolase family
43 (GH43), a family 6 carbohydrate-binding module (CBM6), and a family 36 carbohydrate …

Multiple enzymatic approaches to hydrolysis of fungal β‐glucans by the soil bacterium Chitinophaga pinensis

Z Lu, C RämgAard, İ Ergenlioğlu, L Sandin… - The FEBS …, 2023 - Wiley Online Library
The genome of the soil Bacteroidota Chitinophaga pinensis encodes a large number of
glycoside hydrolases (GHs) with noteworthy features and potentially novel functions …

Enhanced Enzyme Immobilization Using a Novel Agarose‐binding Tag Leads to Improved Flow Reactor Performance

M Peng, M Franzreb, AJ Weber, P Lemke… - …, 2024 - Wiley Online Library
Continuous enzymatic synthesis has gained increasing prominence, extending its
applicability to the chemical industry. A practical approach for integrating enzymes into …

Carbohydrate isomer resolution via multi-site derivatization cyclic ion mobility-mass spectrometry

KR McKenna, L Li, AG Baker, J Ujma, R Krishnamurthy… - Analyst, 2019 - pubs.rsc.org
Oligosaccharides serve many roles in extant life and may have had a significant role in
prebiotic chemistry on the early Earth. In both these contexts, the structural and isomeric …

Analyzing a mixture of disaccharides by IMS-VUVPD-MS

S Lee, SJ Valentine, JP Reilly, DE Clemmer - International journal of mass …, 2012 - Elsevier
Comparative analyses utilizing collision-induced dissociation (CID) and vacuum ultraviolet
photodissociation (VUVPD) for seven isobaric disaccharides have been performed in order …