Phylogenomics and the flowering plant tree of life

C Guo, Y Luo, LM Gao, TS Yi, HT Li… - Journal of Integrative …, 2023 - Wiley Online Library
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

A holocentric twist to chromosomal speciation?

K Lucek, H Augustijnen, M Escudero - Trends in Ecology & Evolution, 2022 - cell.com
Chromosomal rearrangements trigger speciation by acting as barriers to gene flow.
However, the underlying theory was developed with monocentric chromosomes in mind …

Global analysis of Poales diversification–parallel evolution in space and time into open and closed habitats

TL Elliott, D Spalink, I Larridon, AR Zuntini… - New …, 2024 - Wiley Online Library
Poales are one of the most species‐rich, ecologically and economically important orders of
plants and often characterise open habitats, enabled by unique suites of traits. We test six …

Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants

WJ Baker, S Dodsworth, F Forest, SW Graham… - 2021 - ttu-ir.tdl.org
The unveiling of the angiosperm (flowering plant) tree of life over the past three decades has
been one of the great success stories of modern plant biology. Flowering plants underpin …

A bird's eye view of the systematics of Convolvulaceae: novel insights from nuclear genomic data

ARG Simões, LA Eserman, AR Zuntini… - Frontiers in Plant …, 2022 - frontiersin.org
Convolvulaceae is a family of c. 2,000 species, distributed across 60 currently recognized
genera. It includes species of high economic importance, such as the crop sweet potato …

The genome of Eleocharis vivipara elucidates the genetics of C3–C4 photosynthetic plasticity and karyotype evolution in the Cyperaceae

H Liu, H Zhao, Y Zhang, X Li, Y Zuo… - Journal of Integrative …, 2024 - Wiley Online Library
Eleocharis vivipara, an amphibious sedge in the Cyperaceae family, has several remarkable
properties, most notably its alternate use of C3 photosynthesis underwater and C4 …

Chloroplast genomes of four Carex species: Long repetitive sequences trigger dramatic changes in chloroplast genome structure

S Xu, K Teng, H Zhang, K Gao, J Wu, L Duan… - Frontiers in Plant …, 2023 - frontiersin.org
The chloroplast genomes of angiosperms usually have a stable circular quadripartite
structure that exhibits high consistency in genome size and gene order. As one of the most …

Chromosome size matters: genome evolution in the cyperid clade

TL Elliott, F Zedek, RL Barrett, JJ Bruhl… - Annals of …, 2022 - academic.oup.com
Abstract Background and Aims While variation in genome size and chromosome numbers
and their consequences are often investigated in plants, the biological relevance of variation …

Chromosome-scale genome assemblies and annotations for Poales species Carex cristatella, Carex scoparia, Juncus effusus, and Juncus inflexus

J Planta, YY Liang, H **n, MT Chansler, LA Prather… - G3, 2022 - academic.oup.com
The majority of sequenced genomes in the monocots are from species belonging to
Poaceae, which include many commercially important crops. Here, we expand the number …

Phylogenomics and divergence pattern of Polygonatum (Asparagaceae: Polygonateae) in the north temperate region

YQ Qin, MH Zhang, CY Yang, ZL Nie, J Wen… - Molecular Phylogenetics …, 2024 - Elsevier
Polygonatum is the largest genus of tribe Polygonateae (Asparagaceae) and is widely
distributed in the temperate Northern Hemisphere, especially well diversified in …