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Stochastic community assembly: does it matter in microbial ecology?
Understanding the mechanisms controlling community diversity, functions, succession, and
biogeography is a central, but poorly understood, topic in ecology, particularly in microbial …
biogeography is a central, but poorly understood, topic in ecology, particularly in microbial …
The multilayer nature of ecological networks
Although networks provide a powerful approach to study a large variety of ecological
systems, their formulation does not typically account for multiple interaction types …
systems, their formulation does not typically account for multiple interaction types …
High taxonomic variability despite stable functional structure across microbial communities
Understanding the processes that are driving variation of natural microbial communities
across space or time is a major challenge for ecologists. Environmental conditions strongly …
across space or time is a major challenge for ecologists. Environmental conditions strongly …
Stochasticity, succession, and environmental perturbations in a fluidic ecosystem
Unraveling the drivers of community structure and succession in response to environmental
change is a central goal in ecology. Although the mechanisms sha** community structure …
change is a central goal in ecology. Although the mechanisms sha** community structure …
Cohesion: a method for quantifying the connectivity of microbial communities
The ability to predict microbial community dynamics lags behind the quantity of data
available in these systems. Most predictive models use only environmental parameters …
available in these systems. Most predictive models use only environmental parameters …
Rarefaction is currently the best approach to control for uneven sequencing effort in amplicon sequence analyses
PD Schloss - Msphere, 2024 - journals.asm.org
Considering it is common to find as much as 100-fold variation in the number of 16S rRNA
gene sequences across samples in a study, researchers need to control for the effect of …
gene sequences across samples in a study, researchers need to control for the effect of …
Microbial diversity and ecological networks as indicators of environmental quality
B Karimi, PA Maron, N Chemidlin-Prevost Boure… - Environmental …, 2017 - Springer
Evaluating the quality of ecosystems in terms of biological patrimony and functioning is of
critical importance in the actual context of intensified human activities. Microbial diversity is …
critical importance in the actual context of intensified human activities. Microbial diversity is …
A straightforward computational approach for measuring nestedness using quantitative matrices
Nestedness has been one of the most reported patterns of species distribution in
metacommunities as well as of species interactions in bipartite networks. We propose here a …
metacommunities as well as of species interactions in bipartite networks. We propose here a …
Bee diversity effects on pollination depend on functional complementarity and niche shifts
Biodiversity is important for many ecosystem processes. Global declines in pollinator
diversity and abundance have been recognized, raising concerns about a pollination crisis …
diversity and abundance have been recognized, raising concerns about a pollination crisis …
Positive associations fuel soil biodiversity and ecological networks worldwide
Microbial interactions are key to maintaining soil biodiversity. However, whether negative or
positive associations govern the soil microbial system at a global scale remains virtually …
positive associations govern the soil microbial system at a global scale remains virtually …